Transcript Information: S_Transcript_33486.p1


Annotated TAIR IDAT5G02840.1
Annotated Gene NameLHY/CCA1-like 1
Annotated Gene Symbol(s)LCL1
Annotation TypeOrtholog
Chromosome Positionchr5:648794-651212 | Forward length=293
E-Value7.5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6182255444219
Replicate 28.2524938039559
Replicate 38.7990153070613
Condition 2: 8 Hour
Replicate 113.348717603091
Replicate 211.612867996194
Replicate 312.773236923596
Condition 3: 24 Hour
Replicate 19.3382708051395
Replicate 28.8233159572039
Replicate 310.685675301404


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33486.p1 GENE.S_Transcript_33486~~S_Transcript_33486.p1 ORF type:complete len:262 (+),score=25.26,Myb_DNA-binding|PF00249.27|5.2e-10 S_Transcript_33486:339-1124(+)
ATGGTGTCGATGAATCCTGGGTCACCGGAAGGGTTTTACTTGGACGCCGATGGGATGACGTTGCCGGGATTGAACCCGTTCTCGGAGGTGCCGCCGCCGAGTACACCGGCGATGAATACGGCGTCCTCTAGTGCCGATGATTCGAGCAGTAAGAAAGTAAGGAAGCCGTATACGATTACCAAATCGAGAGAGAGTTGGACTGAGCCTGAGCATGATAAGTTTCTTGAAGCTCTACAACTCTTTGACCGTGATTGGAAAAAGATTGAAGCTTTTATCGGTTCAAAAACTGTTATTCAGATACGCAGTCACGCTCAGAAATACTTTCTGAAGGTTCAAAAAAGTGGAAGTAATGAGCATCTCCCGCCTCCCCGGCCTAAACGGAAAGCTGCGCATCCATATCCGCAGAAAGCTCCTAAAAATGCTGCATCGGTTCCGCAAGCAACTGGCTCATTACAATCGTCTTCTCTCTTGCTTGAACCTGGACTTCAACGACCAGATTCTGCACCAATGCCCAGATATCCTAAAACCAGCACGATTGCATCTTCTAGGGTTGCTAACTCTCAAACAGTTGGCTTATCGAATGTGACAAAAGGTGATGTGAAATCCACAGGGCTACCCACTGCCAACAACTGTTCGAGCAGTACTGAAAGCACTGCAATGGGACGCACTACTGGTGAAATGAATGAACTACTGAATCATGGACCCCCATTAAGAGCTGCCTGTAGGATATGGGTGTCTGATCTACTTCTTTCATTAAGAGAAGCTGTGACCATGACGTCCCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33486.p1 GENE.S_Transcript_33486~~S_Transcript_33486.p1 ORF type:complete len:262 (+),score=25.26,Myb_DNA-binding|PF00249.27|5.2e-10 S_Transcript_33486:339-1124(+)
MVSMNPGSPEGFYLDADGMTLPGLNPFSEVPPPSTPAMNTASSSADDSSSKKVRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGSNEHLPPPRPKRKAAHPYPQKAPKNAASVPQATGSLQSSSLLLEPGLQRPDSAPMPRYPKTSTIASSRVANSQTVGLSNVTKGDVKSTGLPTANNCSSSTESTAMGRTTGEMNELLNHGPPLRAACRIWVSDLLLSLREAVTMTSL*

Click here to download the sequence:
Link to NCBI Protein BLAST