Transcript Information: S_Transcript_33489.p1


Annotated TAIR IDAT5G52660.2
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21359423-21362037 | Reverse length=331
E-Value2.1E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3442758362504
Replicate 28.8114546530013
Replicate 39.706703201895
Condition 2: 8 Hour
Replicate 115.581399736357
Replicate 220.363230650401
Replicate 316.498334059583
Condition 3: 24 Hour
Replicate 111.56493831855
Replicate 29.612824105138
Replicate 38.7457243757678


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33489.p1 GENE.S_Transcript_33489~~S_Transcript_33489.p1 ORF type:complete len:323 (+),score=40.19,Myb_DNA-binding|PF00249.27|7.1e-10 S_Transcript_33489:339-1307(+)
ATGGTGTCGATGAATCCGGGTTCACCGGAAGGGTTTTACTTGGATGCCGATGGGATGACGTTGCCGGGATTGAACCCGTTCTCGGCGGTGCCACCGGCGAATTCACCGGCGATGAATACGGCGTCGTCTAGTGCCGATGATTCGACTAGTAAGAAAGTAAGGAAGCCGTATACGATTACCAAATCGAGAGAGAGTTGGACTGAGCCTGAGCATGATAAGTTTCTTGAAGCTCTACAACTCTTTGACCGTGATTGGAAAAAGATTGAAGCTTTTATCGGTTCAAAAACTGTTATTCAGATACGCAGTCACGCTCAGAAATACTTTCTGAAGGTTCAAAAAAGTGGAAGTAATGAGCATCTCCCGCCTCCCCGGCCTAAACGGAAAGCTGCGCATCCATATCCGCAGAAAGCTCCTAAAAATGCTGCATCGGTTCCGCAAGCAACTGGCTCATTACAATCGTCTTCTCTCTTGCTTGAACCTGGACTTCAACGACCAGATTCTGCACCAATGCCCAGATATCCTAAAACCAGCACGATTGCATCTTCTAGGGTTGCTAACTCTCAAACAGTTGGCTTATCGAATGTGACAAAAGGTGATGTGAAATCCACAGGGCTACCCACTGCCAACAACTGTTCGAGCAGTACTGAAAGCACTGCAATGGGACGCACTACTGGTGAAATGAATGAACTACTGAATCATGGACCCCCATTAAGAGTTCTGCCTGATTTTGCTCAAGTATACAAATTCATCGGCAGTGTTTTTGATCCAGAAGCCCGTGACCATTTGCGGAGACTGAAGAAGCTGGATCCAATTGATGTTGAAACGGTATTGCTGTTGATGAGGAACCTATCCGTTAATTTGACTAGTCCTGATTTCGAGGATCATAGAAGACTGCTCGCATCTTATGATATTGATTCTGATAAGGCCCATGCTTGTGGCATGAGTAAGAATGTTTGCTGTAGCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33489.p1 GENE.S_Transcript_33489~~S_Transcript_33489.p1 ORF type:complete len:323 (+),score=40.19,Myb_DNA-binding|PF00249.27|7.1e-10 S_Transcript_33489:339-1307(+)
MVSMNPGSPEGFYLDADGMTLPGLNPFSAVPPANSPAMNTASSSADDSTSKKVRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGSNEHLPPPRPKRKAAHPYPQKAPKNAASVPQATGSLQSSSLLLEPGLQRPDSAPMPRYPKTSTIASSRVANSQTVGLSNVTKGDVKSTGLPTANNCSSSTESTAMGRTTGEMNELLNHGPPLRVLPDFAQVYKFIGSVFDPEARDHLRRLKKLDPIDVETVLLLMRNLSVNLTSPDFEDHRRLLASYDIDSDKAHACGMSKNVCCSS*

Click here to download the sequence:
Link to NCBI Protein BLAST