Transcript Information: S_Transcript_335079.p1


Annotated TAIR IDAT1G52565.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19580061-19580511 | Reverse length=129
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3532034526363
Replicate 21.2464852857353
Replicate 30.72937374341923
Condition 2: 8 Hour
Replicate 11.3253067428727
Replicate 20.3791838752496
Replicate 30.60214258771134
Condition 3: 24 Hour
Replicate 10.61708710425407
Replicate 22.0487061311952
Replicate 30.28499485203521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_335079.p1 GENE.S_Transcript_335079~~S_Transcript_335079.p1 ORF type:complete len:177 (+),score=30.59 S_Transcript_335079:247-777(+)
ATGTCCTCAATTCTAACTTCACAAGGTGTGGTTTTAGCCACAGCCATGGCTGCTTTTTCAGGCACAGTCATCCTCTTAGCTTTGAGGATCCAAAAATCTCTCCCTTCACCTTCTTCTTCTCAATTTCAAGTCAACCCAATTCGTGTTCTTAGGCCTTGTCTCTCTTCAGGTGATTTTTATTTCAATTTCTCACTTTCTCCTCCCCTGTTCTCCTCTGTTTTCCCCTGTTTTCCTCTGTTTTTCCCCTGTTTTTGCACTTTGGTGGGGTTTAATAAAGGTTTGACCTTTATGATGGCAGGTGAAAGAAAAGGTGAGAAGAACAAGAAAAGGGTTAGATTTGCAAAAGATGTGGTGGATCCAACTGGAGATAGTGAAGAGTTTAGAAGACAACATAGCCTTTCAATTTCTTCTTCTACTTGTACAAAGAAGACATCTTCAAGTCAAAACAGGGGAATGCCAGCAAATCGAGTTGCTCTTTACAATGGGATTCTTAGAGATCGTGTGATTCACCGCTTGGGTTACTCTTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_335079.p1 GENE.S_Transcript_335079~~S_Transcript_335079.p1 ORF type:complete len:177 (+),score=30.59 S_Transcript_335079:247-777(+)
MSSILTSQGVVLATAMAAFSGTVILLALRIQKSLPSPSSSQFQVNPIRVLRPCLSSGDFYFNFSLSPPLFSSVFPCFPLFFPCFCTLVGFNKGLTFMMAGERKGEKNKKRVRFAKDVVDPTGDSEEFRRQHSLSISSSTCTKKTSSSQNRGMPANRVALYNGILRDRVIHRLGYSY*

Click here to download the sequence:
Link to NCBI Protein BLAST