Transcript Information: S_Transcript_33563.p1


Annotated TAIR IDAT1G78420.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29505278-29507272 | Forward length=401
E-Value1.6E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.012276373178
Replicate 29.319626623433
Replicate 39.4757506084706
Condition 2: 8 Hour
Replicate 111.214213873665
Replicate 212.30451675185
Replicate 310.547669418327
Condition 3: 24 Hour
Replicate 112.127676696502
Replicate 210.159639672156
Replicate 39.871386344761


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33563.p1 GENE.S_Transcript_33563~~S_Transcript_33563.p1 ORF type:complete len:580 (+),score=140.56 S_Transcript_33563:492-2231(+)
ATGGGGAATAAACTGGGGAGACGCCGTCATGTGGTGGACGAAAAGTATACGAAGCCACAAGGGTTGTATCAAATCAAAGATGTTGATTATAAGAAGCTTAGGAAGCTTATTCTTGAATCTAAGCTTGCCCCTTGTTACCCTGGAGGTGATGAGTGCGATTACGGCGTCCTTGAAGAATGCCCTATTTGTTTTCTGTATTATCCAACTCTTAATCGATCAAGATGTTGTATGAAGAGTATATGTACAGAGTGTTTTCTACAGATGAAGAATCCGAATTCTACTAGACCTACTCAATGCCCATTCTGTAAAACTTCCAATTATGCTGTTGAGTATCGGGGTGTAAAGTCAAAGGAGGAGAGGGGAATGGAGCAAATTGAAGAACAAAAGGTCATTGAAGCCAAGATTAGGATGCGTCAGCAGGAGCTTCAGGAGGAAGAAGACAGACAAAACAGAAATGAATTAAGAAGCTCTCCAAGCAGACCTCTACAAACAGGGAACCCTAGCTGTAGCACATCTGGAGTCGTAGAGTGTGAAGAAGTTGCCCCCTCTCAAGAGTCAAGTGTTACCCAAATGCTTCAACGACCACAAAATCCCAGGCAAAACAGAGATGATGAATTTGATCTGGACCTTGAAGATATCATGGTTATGGAAGCTATATGGCTTTCGATACAGGAGAATGGAACAGCCAAACATCCTCCTCCTGGTGATGCTTTGCCTGAGCAGTATGCTGCTGAAGATCGCTACATGTCACCAGTGACAGGACCAGTGGTCGGATCATCGTCATCTCCTTCTGGTGGTCTTGCATGTGCAATTGCGGCCCTCGCTGAGCGTCAGCAGTTGACTGGAGAATCTTCCACCGGCGGTAGCGGACATGTGTCACCTTTAGACATGCTTCCGAGCACCAGCCAGAGTTTAAAGAGGGTGAAGAAGAATCAACGAAACCCACCAGAAAACTCTATATCCGCAAAGGAAATGTATAGTGCAAGGATGTCTGCTCAAGAATACATGGTTGATCATTCATCTGAGATCACCAGGCCAGGTACCAGCTATGCTTGCTCCAATGAGTCTGGAGATGAAGCTACTATACTGCCACCACCACCACCACCACCACCGCTCTATGGTAGGCGGAATTCTAAGAGGGTAAAAGATATTCAAAGAAAATATTCTCATCTCGAGAGAACGTCTTACCAGTTTGTTTCTGATGAAAGGATGTTAGCAGAAGAATGGGATTTTGACCATGGCTCTATGGTCGCTGAAGCTGGGACCTCTTATGCTAGCTCCGATGAGTCAAATGAGAGCATTGAGGCGACTGCTTTGCCCCCTCCACCAGCACCACCACTGTTGTGGAACATTTATGGCATTTCTAATGAGTCTCATGAGGGCCTCCAATCTCATCGACCACCTTTGTCAGCATACAATGAAGTTGGTACTAGTGTTGGCTGTTCAGATGACGGGGAAAATGGCAGCAATTACCTATCCCTAGTGCCACCTCCACCCCTACAACTGTCAGCTTGTGATGATGCCAGTACTAGAGGTACCTGTTCAGATGATGGCAGGGGGTACCTGGCCTTAACACGACCTCCATCATCCCAGCAATATAGTCAAGATAGCAGTTTTCAGTCTGCCATGCCCAGCCCAATAGTTCCTGAGAGTTTTGAGGAACAGATGATGCTGGCCATGGCTGTTTCTCTAGCTGAGGCTCGAGCCAGGACAACTTCCCAGGGAGTTGCATGGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33563.p1 GENE.S_Transcript_33563~~S_Transcript_33563.p1 ORF type:complete len:580 (+),score=140.56 S_Transcript_33563:492-2231(+)
MGNKLGRRRHVVDEKYTKPQGLYQIKDVDYKKLRKLILESKLAPCYPGGDECDYGVLEECPICFLYYPTLNRSRCCMKSICTECFLQMKNPNSTRPTQCPFCKTSNYAVEYRGVKSKEERGMEQIEEQKVIEAKIRMRQQELQEEEDRQNRNELRSSPSRPLQTGNPSCSTSGVVECEEVAPSQESSVTQMLQRPQNPRQNRDDEFDLDLEDIMVMEAIWLSIQENGTAKHPPPGDALPEQYAAEDRYMSPVTGPVVGSSSSPSGGLACAIAALAERQQLTGESSTGGSGHVSPLDMLPSTSQSLKRVKKNQRNPPENSISAKEMYSARMSAQEYMVDHSSEITRPGTSYACSNESGDEATILPPPPPPPPLYGRRNSKRVKDIQRKYSHLERTSYQFVSDERMLAEEWDFDHGSMVAEAGTSYASSDESNESIEATALPPPPAPPLLWNIYGISNESHEGLQSHRPPLSAYNEVGTSVGCSDDGENGSNYLSLVPPPPLQLSACDDASTRGTCSDDGRGYLALTRPPSSQQYSQDSSFQSAMPSPIVPESFEEQMMLAMAVSLAEARARTTSQGVAWQ*

Click here to download the sequence:
Link to NCBI Protein BLAST