Transcript Information: S_Transcript_33591.p1


Annotated TAIR IDAT2G28105.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C-terminal (InterPro:IPR013955); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11976764-11977713 | Forward length=166
E-Value4.3E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4677731202847
Replicate 28.9142584070767
Replicate 35.0298371137092
Condition 2: 8 Hour
Replicate 110.339583184064
Replicate 210.395000378055
Replicate 311.626825966354
Condition 3: 24 Hour
Replicate 18.9365432461522
Replicate 27.4401401639524
Replicate 36.6239712579093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33591.p1 GENE.S_Transcript_33591~~S_Transcript_33591.p1 ORF type:5prime_partial len:198 (+),score=30.91,Rep_fac-A_C|PF08646.6|1.4e-06 S_Transcript_33591:2-595(+)
AAAAGGGGAAGCAATGAAAGGAATTCTCTTGGCTCCGAAACAAAAACTGGTCATCACTCATCCAGGGTATTTGAACTTGTAGTTACAGCGACCCTATTCCTCGAAGTGGAAGCCATGGAAGACAACAACAAGCCACAAACCCTAATGTGCGCCATCATAGCCGTCGATCCCACCAATGATTTCTCATACATGGTTTGTTCAGTTTGTGAAAAACCCCTTTACTCCCCCAATTTTCGTTGCAAATTCTGCAACCGCAATACCTTGGGTCCCAATTCCTTCGCCACCAAACGCCTCTTCCGCCTCCTTATGTCAATAGCATCCGATACGAAGGTGTTTAGGGTGATATGCTTTGATAGGGCAGCTAAGGTTCTCTTGGGTTGCTCTGCTGATGAGTTCTTCAACTTTGCGAAGCTTCACCCTTTTGCAGCTACAAATGCTGGAAAACTTCTGGAGGGGGAACTGTTTACAATGACATTGTCGAAGCCAAAGAATGGTAATGCTGAACATCTACGTGTTGTATCTATTGTTCCTTTGAGTTCTGGATTTCAGCCAGCAATTCAGTCATTGAAGGAACTCTATCGAGTGGGGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33591.p1 GENE.S_Transcript_33591~~S_Transcript_33591.p1 ORF type:5prime_partial len:198 (+),score=30.91,Rep_fac-A_C|PF08646.6|1.4e-06 S_Transcript_33591:2-595(+)
KRGSNERNSLGSETKTGHHSSRVFELVVTATLFLEVEAMEDNNKPQTLMCAIIAVDPTNDFSYMVCSVCEKPLYSPNFRCKFCNRNTLGPNSFATKRLFRLLMSIASDTKVFRVICFDRAAKVLLGCSADEFFNFAKLHPFAATNAGKLLEGELFTMTLSKPKNGNAEHLRVVSIVPLSSGFQPAIQSLKELYRVGC*

Click here to download the sequence:
Link to NCBI Protein BLAST