Transcript Information: S_Transcript_33619.p1


Annotated TAIR IDAT3G16010.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5434142-5436244 | Forward length=642
E-Value6.3e-308
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.795840123705
Replicate 213.633138830351
Replicate 310.932250791694
Condition 2: 8 Hour
Replicate 116.49700005665
Replicate 214.809038171894
Replicate 314.311111520954
Condition 3: 24 Hour
Replicate 113.120669014791
Replicate 211.367540712036
Replicate 311.738561547035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33619.p1 GENE.S_Transcript_33619~~S_Transcript_33619.p1 ORF type:complete len:636 (+),score=125.45,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|7e-11,PPR_2|PF13041.2|1.2e-10,PPR_2|PF13041.2|3.2e-08,PPR_2|PF13041.2|2.4e-12,PPR_2|PF13041.2|6.3e-18,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|0.09,PPR_2|PF13041.2|2.6e-11,PPR_2|PF13041.2|2.7e-14,PPR_2|PF13041.2|5.9e-07,PPR_2|PF13041.2|1.1e-11,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|2.4e-11,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|5.9e-08,PPR_1|PF12854.3|0.00026,PPR_1|PF12854.3|3.8e-06,PPR_1|PF12854.3|1.2e+02,PPR|PF01535.16|6,PPR|PF01535.16|0.58,PPR|PF01535.16|0.0002,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.0096,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|0.0004,PPR|PF01535.16|0.72,PPR|PF01535.16|5.3e-08,PPR|PF01535.16|0.00041,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0093,PPR|PF01535.16|8.4e-08,PPR_3|PF13812.2|8,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|6.3e-06,PPR_3|PF13812.2|6.9e-05,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|4.2e-06,PPR_3|PF13812.2|4.8e-05,PPR_3|PF13812.2|26,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|1.6e+04,TPR_12|PF13424.2|12,TPR_12|PF13424.2|1.5e+02,TPR_12|PF13424.2|10,TPR_12|PF13424.2|0.48,TPR_12|PF13424.2|2.8e+03,TPR_12|PF13424.2|7.5e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|47,TPR_14|PF13428.2|3.3e+03,TPR_14|PF13428.2|57,TPR_14|PF13428.2|4.9e+02,TPR_14|PF13428.2|3.6e+02,TPR_14|PF13428.2|5.6e+02,TPR_14|PF13428.2|2.5e+03 S_Transcript_33619:357-2264(+)
ATGATGTTCAGGCCAGCTGTTGGGAAACGAACAATATCAACTTTTCCAAGTTTATGTCAGAGAATTAAGCAAACAGAAAATGAGATAGTTAAAATGTTTCTTGTGCAAAAATTGACAACTGACTCTCATAACTCGTCATTGAGTCGGAAGAATTCCTCTCGAATGTTGGATGAGAGATTTATAAGGATTTTGAAGATATTTAAGTGGGGACCTGATGCAGAAAAGGCTGTAGAAGTACTTAAGCTGAAGGTAGATCATAGATTGGTACGTGAGGTCTTAAAAATAGTAGATGTTGATGTAAATGTGAAGTTACAGTTTTTCAAGTGGGCAGGGAAGAGGAAGAACTTTGTGCATGACTCTACTACTTACATGTCTTTGATCTATTGTTTGCTTGAAGCTGGGTTATTTGGTGAAGTATGGAAGACAGTCCAAGAATTTGTTCGAAGTCCCTGTCTTATGAGCTCATCTGAATTTTCTACTATTGTCAGAATTTTAGGCCAGGCTAAGATGGTGAATAAAGCTGTCTCAGTTTTCTATCAGATCAAAGGACGAAAGTGCAAACCAACAACTAGCACTTACAACTCCATTATTTTGATGTTGATGCAAGAAGGTCACTATGAAAAGGTGCATGAGGTCTATGATGAAATGTGCAATGATGGTGACTGCTTTCCTGATACAATAACATATGGTGCTTTGATACAAGCATTCGGAAAACTGGGTCGTGATGATTCTGCTATAAGGCTGTTTGATGAGATGAAGGAGAATGGGTTGCTTCCGAATGCAAAGATTTATACAACAATACTGGCAATTCTGTTCAAGCTGGCTAAGGTTGATAAGGCATTAGCTCTGGTTAGAGAAATGAAAGATCAGGGCTGTGCACTAACTGTCTATACCTACACTGAATTGATAAAAGGACTAGGAAAAGTGGGCAGGGTGGATGATGCTTACAGTACGTTTTTGAATATGTTAAAAGAGGGTTGCAAGCCAGATGTTGTTTTGATAAACAATCTAATAAACATCTTAGGTAAATCTGGCCGCTTGGCTGATGCTCTTAAGCTGTTTGAAGACATGGAATCTTTGCAATCTGTGCCAACTGTGGTTACCTATAACACAGTAATTAAATCTTTATTTGAAGCAAATGCCCCAGCTTCTAAGGCTTGGGAATTATTTGAGAAAATGAAGGCGATTGGGATTGCCCCTAGTTCTTACACTTATTCAATTCTGATCGATGGCTTTTGCAAGAAGAACAGGGTTGAGACAGCTTTGCTGCTTCTTGAAGAGATGGATGAGAAGGGTTTCCCTCCTTGTCCTGCAGCATATTGCAGTTTGATTAACAGCCTTGGGAAAACAAAACGTTATGATGCTGCAAAGGAGTTGTTCCAAGAGCTGAGGGAAAATTGTGGTACCTCGAGTGCTAGAGTGTATGCTGTAATGATAAAGCACTTTGGTAAAAGCGGCTCCCTGGATGAAGCTGTAGATCTGTTTAATGAGATGAAGAAACGTGGCTGTACTCCTAATGTTTATGCGTATAATGCGCTGATGTCTGGGCTAGTGAGGGCTGGCATGATAAATGAAGCACAGACCCTACTTCGAACTATGGAAGAAAATGGCTGTCCACCAGATATAAATTCACACAATATAATTTTAAATGGCCTAGCTAAGGCAGGTGGTCCACATTGGGTGATAGAAATGTTCGAGAAGATGAAGAATTCAACAATTAAGCCAGATGCTGTTTCTTACAACACTGTTCTTAGTTGCTTTAGTCGAGCTGGTATGTTTGAGGAATCTGTGAGGTTGATGAAAGAGATGGACAGAAAAGGTTTCAAGTATGACTTAATTACATACTCATCAGTGCTTGAAGCGGTTGGAACAATTGATGATGACCCTACAGCCACAACTACTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33619.p1 GENE.S_Transcript_33619~~S_Transcript_33619.p1 ORF type:complete len:636 (+),score=125.45,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|7e-11,PPR_2|PF13041.2|1.2e-10,PPR_2|PF13041.2|3.2e-08,PPR_2|PF13041.2|2.4e-12,PPR_2|PF13041.2|6.3e-18,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|0.09,PPR_2|PF13041.2|2.6e-11,PPR_2|PF13041.2|2.7e-14,PPR_2|PF13041.2|5.9e-07,PPR_2|PF13041.2|1.1e-11,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|2.4e-11,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|5.9e-08,PPR_1|PF12854.3|0.00026,PPR_1|PF12854.3|3.8e-06,PPR_1|PF12854.3|1.2e+02,PPR|PF01535.16|6,PPR|PF01535.16|0.58,PPR|PF01535.16|0.0002,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.0096,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|0.0004,PPR|PF01535.16|0.72,PPR|PF01535.16|5.3e-08,PPR|PF01535.16|0.00041,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0093,PPR|PF01535.16|8.4e-08,PPR_3|PF13812.2|8,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|6.3e-06,PPR_3|PF13812.2|6.9e-05,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|4.2e-06,PPR_3|PF13812.2|4.8e-05,PPR_3|PF13812.2|26,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|1.6e+04,TPR_12|PF13424.2|12,TPR_12|PF13424.2|1.5e+02,TPR_12|PF13424.2|10,TPR_12|PF13424.2|0.48,TPR_12|PF13424.2|2.8e+03,TPR_12|PF13424.2|7.5e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|47,TPR_14|PF13428.2|3.3e+03,TPR_14|PF13428.2|57,TPR_14|PF13428.2|4.9e+02,TPR_14|PF13428.2|3.6e+02,TPR_14|PF13428.2|5.6e+02,TPR_14|PF13428.2|2.5e+03 S_Transcript_33619:357-2264(+)
MMFRPAVGKRTISTFPSLCQRIKQTENEIVKMFLVQKLTTDSHNSSLSRKNSSRMLDERFIRILKIFKWGPDAEKAVEVLKLKVDHRLVREVLKIVDVDVNVKLQFFKWAGKRKNFVHDSTTYMSLIYCLLEAGLFGEVWKTVQEFVRSPCLMSSSEFSTIVRILGQAKMVNKAVSVFYQIKGRKCKPTTSTYNSIILMLMQEGHYEKVHEVYDEMCNDGDCFPDTITYGALIQAFGKLGRDDSAIRLFDEMKENGLLPNAKIYTTILAILFKLAKVDKALALVREMKDQGCALTVYTYTELIKGLGKVGRVDDAYSTFLNMLKEGCKPDVVLINNLINILGKSGRLADALKLFEDMESLQSVPTVVTYNTVIKSLFEANAPASKAWELFEKMKAIGIAPSSYTYSILIDGFCKKNRVETALLLLEEMDEKGFPPCPAAYCSLINSLGKTKRYDAAKELFQELRENCGTSSARVYAVMIKHFGKSGSLDEAVDLFNEMKKRGCTPNVYAYNALMSGLVRAGMINEAQTLLRTMEENGCPPDINSHNIILNGLAKAGGPHWVIEMFEKMKNSTIKPDAVSYNTVLSCFSRAGMFEESVRLMKEMDRKGFKYDLITYSSVLEAVGTIDDDPTATTTF*

Click here to download the sequence:
Link to NCBI Protein BLAST