Transcript Information: S_Transcript_33631.p1


Annotated TAIR IDAT4G05000.1
Annotated Gene NameVacuolar protein sorting-associated protein VPS28 family protein
Annotated Gene Symbol(s)VPS28-2
Annotation TypeOrtholog
Chromosome Positionchr4:2563953-2564585 | Forward length=210
E-Value7.9E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.780369413596
Replicate 224.440814779283
Replicate 323.743642263318
Condition 2: 8 Hour
Replicate 125.60323807536
Replicate 226.792633101469
Replicate 325.52796120357
Condition 3: 24 Hour
Replicate 121.06003737716
Replicate 220.085294091613
Replicate 321.37077415164


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33631.p1 GENE.S_Transcript_33631~~S_Transcript_33631.p1 ORF type:5prime_partial len:334 (+),score=49.97,VPS28|PF03997.8|7.9e-70 S_Transcript_33631:2-1003(+)
CGGGGAGAGGTGGTGTGGTCAGGGCAGAACAGAGGTAGGGGCAGAGGAGGCTGGTCTAGCGATGGCGTAAGCACTATGAAAAATCACAAGTGGATCCCCACACGCAACCTCTCTGTCTTCACCCCCTACATCCCTCCTCTTTTTCTTTCACCTGCTACTTCTCCTACTACACCCCCTCTTCAAAACCCCACTTTTCCAAAACCGCGTTTCTCCTTCTCCTTGACAAGTGCTCCCTTTTGCGCGTGTCCCATTTCTTCTCCAATTTTTTGTTACAACCTTACTAGAAACTTGGGATCTTTAACCTCAAAAAACAAATCAAAAATAAAAAAACCCCTGTTTGGATTTAACCTTATTATTATAGAGAAAAGAAAGATGGAAGTGAAGTTGTGGAATGACAAGCGTGAAAGAGAAATGTATGACAATTATGCTGAACTTTATGCCATTATCAAGGCCACTGAGAAGCTAGAAAAAGCCTATATTAGGGACATAATCACCCCTTCGGAATACGAAACTGAATGCCAGAAATTGATAGCCCATTTCAAAACCCTTTCATCCACTTTGAAAGACAATGTCCCAAGTGTCGAAAGGTTTGCTGATATGTACAAGATGGACTGCCCTGCTGCCTTGAATAGGCTGGTGACATCCGGTGTGCCCGCCACTGTTGAGCACAGGGCGGCCGCTGCCGCGTCTGCCACCACCTCGGCTGCCATTGTGGCTGAGTGTGTTCAGAATTTCATCACAGCTATGGACTCGTTGAAACTGAACATGGTGGCTGTTGATCAAGTTTACCCATTGTTGTCGGATCTCTCGACCTCATTGAACAAGCTGAGCTTTTTGCCTCATGATTTCGAGGGGAAGACGAAGATGAAGGAATGGCTGGGACGGTTGTCCAAGATGGGAGCTGCGGATGAGCTCACTGAGCAGCAAGCAAGGCAGCTTCACTTCGATCTCGAGTCTTCGTACAACTCGTTTATGGCTGCTTTGCCCAATGCTGGGACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33631.p1 GENE.S_Transcript_33631~~S_Transcript_33631.p1 ORF type:5prime_partial len:334 (+),score=49.97,VPS28|PF03997.8|7.9e-70 S_Transcript_33631:2-1003(+)
RGEVVWSGQNRGRGRGGWSSDGVSTMKNHKWIPTRNLSVFTPYIPPLFLSPATSPTTPPLQNPTFPKPRFSFSLTSAPFCACPISSPIFCYNLTRNLGSLTSKNKSKIKKPLFGFNLIIIEKRKMEVKLWNDKREREMYDNYAELYAIIKATEKLEKAYIRDIITPSEYETECQKLIAHFKTLSSTLKDNVPSVERFADMYKMDCPAALNRLVTSGVPATVEHRAAAAASATTSAAIVAECVQNFITAMDSLKLNMVAVDQVYPLLSDLSTSLNKLSFLPHDFEGKTKMKEWLGRLSKMGAADELTEQQARQLHFDLESSYNSFMAALPNAGT*

Click here to download the sequence:
Link to NCBI Protein BLAST