Transcript Information: S_Transcript_336465.p1


Annotated TAIR IDAT3G01650.1
Annotated Gene NameRING domain ligase1
Annotated Gene Symbol(s)RGLG1
Annotation TypeOrtholog
Chromosome Positionchr3:242734-245062 | Forward length=489
E-Value3E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3226002470361
Replicate 24.5286778565425
Replicate 35.921088953156
Condition 2: 8 Hour
Replicate 14.6017947526445
Replicate 24.4743697279453
Replicate 34.0387921777859
Condition 3: 24 Hour
Replicate 14.7138959111282
Replicate 26.4412938164356
Replicate 33.4514376554369


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_336465.p1 GENE.S_Transcript_336465~~S_Transcript_336465.p1 ORF type:5prime_partial len:190 (-),score=30.56,Copine|PF07002.12|4.1e-27 S_Transcript_336465:419-988(-)
AAAACGGTTGATGCAATTGTGCACGCAAGCAAATATCCTCTTTCAATTGTGTTGGTTGGGGTTGGGGATGGGCCATGGGACATGATGAAGGAGTTTGATGATAATATTCCTGCCAGGGATTTTGATAATTTTCAGTTTGTGAATTTCAACGAAATAATGGCAAAAAATGCCCCTTACACTCGGAAAGAGACTGAATTTGCTTTATCAGCACTGATGGAGATCCCTTTGCAATACAAAGCAACCTTAGAACTTAATATACTGGGTCGGCATCAGGGAACTTCACCTGAGAGAGTTCCTCTACCTCCACCTTTGTATAGTGCAAGATCTTTCAGCAATGCATCGTCCTTCAATTATTCCTCTCGCTCAACAAGCTTTCAGTCTAGTACACCCTCCTATTACGGAAACAGTGGAAACACCGGTACAGTCCCATCTGCACCCAGTTCTTATGACACTGCACCAAGTTCTTATGACACGGGCTCAAGTGCTGCAACCTCTGCTTATGATAATCTGGTATTGTCTGCTTTAAATTTGCTTACATTTTTGTTTCCAGAATTTGTTTATCAAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_336465.p1 GENE.S_Transcript_336465~~S_Transcript_336465.p1 ORF type:5prime_partial len:190 (-),score=30.56,Copine|PF07002.12|4.1e-27 S_Transcript_336465:419-988(-)
KTVDAIVHASKYPLSIVLVGVGDGPWDMMKEFDDNIPARDFDNFQFVNFNEIMAKNAPYTRKETEFALSALMEIPLQYKATLELNILGRHQGTSPERVPLPPPLYSARSFSNASSFNYSSRSTSFQSSTPSYYGNSGNTGTVPSAPSSYDTAPSSYDTGSSAATSAYDNLVLSALNLLTFLFPEFVYQI*

Click here to download the sequence:
Link to NCBI Protein BLAST