Transcript Information: S_Transcript_336478.p1


Annotated TAIR IDAT3G56030.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20791259-20792314 | Forward length=351
E-Value9.3E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78970330074719
Replicate 20.39280930962934
Replicate 30.43780975866114
Condition 2: 8 Hour
Replicate 11.3288818891982
Replicate 21.3277061507256
Replicate 31.5812943327138
Condition 3: 24 Hour
Replicate 10.45375128912213
Replicate 20.13450333279731
Replicate 30.37421430868125


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_336478.p1 GENE.S_Transcript_336478~~S_Transcript_336478.p1 ORF type:5prime_partial len:337 (+),score=51.06,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|6.8e-05,PPR_2|PF13041.2|6.1e-08,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|43,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|1.3,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.33,PPR|PF01535.16|0.00055,PPR|PF01535.16|4.5,PPR|PF01535.16|46,PPR|PF01535.16|1.1,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|18,PPR_1|PF12854.3|46,PPR_1|PF12854.3|3e+02,PPR_3|PF13812.2|11,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.97,PPR_3|PF13812.2|19,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|3.2e+02 S_Transcript_336478:3-1013(+)
AAACCCTTTTGCACAAAAATGCTAACCCTTCGTAAAATGCTCAAGCCCAGACACTCCACGATCCCATGGTCTCTACTTCACACCAGCACTCTGTGTCGAACCCATCCACAAGACCCAACCACCGAACCAACCACTGTCCACTACGACAACCTGGTGAACCAAGCAGGCCGATCTAAAGACCTCAAACGAGTCCAACACCTTCTCATTAAGCGCATCAATGATGGGTGCTTAAACAGCAAAGATACCTTCAACTTCATCACAACTACCCAAACCTCTCTTTCTTTGCTCGATGACCTGTTTGAATGTCTTGCTTCTCTCCCTAAAGGAATACCCAGAAAGAGCGCCTTTGATTCTTTTATCAATAGGTTGTCGAAACTGGGTCTTATCAAAGATGCACTCAAGGTGCTCGACAAAATGCGTGAGAGAGAGTTTGAGCTCAATGCTTGTTCTTTTCACCCGGTTATCAATGCACTTACTAGGAAGAAAGACATGGAGAGTGCCTTGAGGGTGTTGGAGGGAATCAAGGAGGTGGGAATCGAACCTGATACGACATCGTATAACTACCTCTTGACGGGGTATTGCCTTAAGGGCGAGGTGATTAGTGCATCTGATTTGCTGAGCAAGATGGTGGGAAAAGAAGGGTTGAAGGGTGATTCAAGGACGTACGATGCGATGGTGCTCGGGGCTTCTAGGGTGGGGAAGGTGGAGGGGGCCGTGGCGATGGTGCGAGCAGCGTTGGAGGATGGGGTGAGTTTGATGTACTGCACGTATGCGCATGTGATCAAAGCGTTGTTAGAGGAAGGGTATTATGACCAGGCTGTGAAGTTTGTTATGAGCTTTGCTGGGAGGGAGAGGGGTTTGGATAAAGAGAACTTTGAGTTGTTGGCTAATGGGTTTATTAAGTTAGAAAGGTTTGAGGATGCTAAGATGGTGGTTAATGAAATGAATATTAGGGGCTTGCCTTTGGGTAAGAAATTGATGGATTTTTACCATTTGCATGGATCAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_336478.p1 GENE.S_Transcript_336478~~S_Transcript_336478.p1 ORF type:5prime_partial len:337 (+),score=51.06,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|6.8e-05,PPR_2|PF13041.2|6.1e-08,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|43,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|1.3,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.33,PPR|PF01535.16|0.00055,PPR|PF01535.16|4.5,PPR|PF01535.16|46,PPR|PF01535.16|1.1,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|18,PPR_1|PF12854.3|46,PPR_1|PF12854.3|3e+02,PPR_3|PF13812.2|11,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.97,PPR_3|PF13812.2|19,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|3.2e+02 S_Transcript_336478:3-1013(+)
KPFCTKMLTLRKMLKPRHSTIPWSLLHTSTLCRTHPQDPTTEPTTVHYDNLVNQAGRSKDLKRVQHLLIKRINDGCLNSKDTFNFITTTQTSLSLLDDLFECLASLPKGIPRKSAFDSFINRLSKLGLIKDALKVLDKMREREFELNACSFHPVINALTRKKDMESALRVLEGIKEVGIEPDTTSYNYLLTGYCLKGEVISASDLLSKMVGKEGLKGDSRTYDAMVLGASRVGKVEGAVAMVRAALEDGVSLMYCTYAHVIKALLEEGYYDQAVKFVMSFAGRERGLDKENFELLANGFIKLERFEDAKMVVNEMNIRGLPLGKKLMDFYHLHGSG*

Click here to download the sequence:
Link to NCBI Protein BLAST