Transcript Information: S_Transcript_336555.p1


Annotated TAIR IDAT1G15170.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5220690-5222756 | Forward length=481
E-Value8.5E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.330650061759
Replicate 20.61285526548652
Replicate 30.10245964490889
Condition 2: 8 Hour
Replicate 10.23694878130148
Replicate 20.12428804799848
Replicate 30.71052825349938
Condition 3: 24 Hour
Replicate 10
Replicate 20.12591006431304
Replicate 30.42036740675194


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_336555.p1 GENE.S_Transcript_336555~~S_Transcript_336555.p1 ORF type:5prime_partial len:180 (+),score=25.57,MatE|PF01554.14|6.7e-18,MatE|PF01554.14|1.4e+03 S_Transcript_336555:1-540(+)
ACAAGCATAAGAGTCTCCAATGAACTTGGGGCAGGAAACCCACGAGGTGCTCAAGTAGCAGTTTGTGGGGCTACAATAATTGCAGTAGCAAATGGTCTTGTTGTAAGCTCAATCCTCCTTTCTACAAGGAAAGTTTTTGGCTATGCTTTTACTAGTGACAAGGAAGTTGTTGATTATGTCAACAAAATGGCACCTTTAGTTTGTCTCAATCCTATAATGGACAGCCTACAAGGTGTTCTTTCAGGTGTGGTTAGGGGATGTGGCTGGCAACACATAGGTGCTTTTGTAAATTTGGGTGCATTCTATCTTGTGGGAATTCCACTTTCAGCTATATTAGGCTTCTGGGTGCAAATGAGAGGAATAGGCCTTTGGATTGGAATAGTATCCGGTGCTACTCTACAGACCATCATTCTAGCCATGCTGACTATTTTTACCAACTGGGAACATATGGCGACAAAAGCAAGGCAAAGAATATTTGAAGAAAACTCTGGAGTTTGTAATAGCTCTAATGTAGATGAACAGAGATTGCTGGTCAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_336555.p1 GENE.S_Transcript_336555~~S_Transcript_336555.p1 ORF type:5prime_partial len:180 (+),score=25.57,MatE|PF01554.14|6.7e-18,MatE|PF01554.14|1.4e+03 S_Transcript_336555:1-540(+)
TSIRVSNELGAGNPRGAQVAVCGATIIAVANGLVVSSILLSTRKVFGYAFTSDKEVVDYVNKMAPLVCLNPIMDSLQGVLSGVVRGCGWQHIGAFVNLGAFYLVGIPLSAILGFWVQMRGIGLWIGIVSGATLQTIILAMLTIFTNWEHMATKARQRIFEENSGVCNSSNVDEQRLLVS*

Click here to download the sequence:
Link to NCBI Protein BLAST