Transcript Information: S_Transcript_336659.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8273533044648
Replicate 25.0732617699098
Replicate 35.1284613708408
Condition 2: 8 Hour
Replicate 18.2108454696983
Replicate 29.3315732294047
Replicate 39.233067679163
Condition 3: 24 Hour
Replicate 18.5276817904459
Replicate 28.604976587811
Replicate 37.0136166260216


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_336659.p2 GENE.S_Transcript_336659~~S_Transcript_336659.p2 ORF type:complete len:187 (+),score=21.95,RVT_1|PF00078.23|1.2e-19 S_Transcript_336659:1864-2424(+)
ATGGCTTTGTTATATTTTGGTTTCCCTATGGTTTTTGTGGATAGAGTTCTAACATGCATAATCTCAGCTCAGTTTTCAATCAACTTTAATGGAGAGTTAAGGGGGTTCTTCAAGGGTGGTTGTGGTGTGAGGCAAGGTGATCCCATGTCTCGTTATCTGTTTGTACTATGTATGGAGGTGTTATCTAGAATGTTGAGGAGATGCTTTGCTATGGAGGGATTCAATGCACATCAAAAATGCCATAGAATAAAGTTGAATCACTTGGCATTTGCTGATGATTTGTTGCTTTTCTGTAGAGGGATCATTACCTCAGTGAGGGTTTTGGAATCAACTTTCAAACAATTTTCCAGCATGTCAGGGTTGTATGCAAATCGAAGTAAAGGCAATATATACTTTGGAGGCTTAGGGGAGCAGGAAAAAGGGGTTTTATTGACCGCCACTGGTTACAGACAGGGAGAAATGCCCTTTAAATATTTGGGGGTGCCCCTGACAACTTCTAGACTCACAAAGACCATGTGTCAACCCTTGCTGATGACCATTAAGAACCACATCCATCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_336659.p2 GENE.S_Transcript_336659~~S_Transcript_336659.p2 ORF type:complete len:187 (+),score=21.95,RVT_1|PF00078.23|1.2e-19 S_Transcript_336659:1864-2424(+)
MALLYFGFPMVFVDRVLTCIISAQFSINFNGELRGFFKGGCGVRQGDPMSRYLFVLCMEVLSRMLRRCFAMEGFNAHQKCHRIKLNHLAFADDLLLFCRGIITSVRVLESTFKQFSSMSGLYANRSKGNIYFGGLGEQEKGVLLTATGYRQGEMPFKYLGVPLTTSRLTKTMCQPLLMTIKNHIHH*

Click here to download the sequence:
Link to NCBI Protein BLAST