Transcript Information: S_Transcript_336729.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95046432982787
Replicate 20.15759135398225
Replicate 30.26346765833715
Condition 2: 8 Hour
Replicate 10.15232421655095
Replicate 20.47939675656557
Replicate 30.45676816296389
Condition 3: 24 Hour
Replicate 10.15603488207567
Replicate 20.16188436840248
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_336729.p1 GENE.S_Transcript_336729~~S_Transcript_336729.p1 ORF type:3prime_partial len:140 (-),score=-1.04,PIF1|PF05970.10|2.5e-08 S_Transcript_336729:3-419(-)
ATGAGCCCACATTGTCTAAGTTCAAAGCTTAACTGTCCTGTCATCTTGCTTCGCAATCTAAACCCCTCTGTCGGCCTTTGCAATGGAACTAGGCTTATTTGTCGGGGATTTAAGACAAACCTGGTTATTTGTGAGATAGCAACAAGATATCGTGCTGGTGATGTTCAGGATATGAGCTTTTTGGGCAGCCATAGAATCTTTACACCCACTCTCTTTTTTTTTTTTTTTTTTGGGTTTTGTATCTGCACTGCCAACTTAATTTACAACCTTTTGATGTGTCATGTCTCTGTTCAACCTGTACATGACATTTACATTTTTGGATGTGATCATGAATTCCTATATCCAGTTCAGGACACTTTGTTATTATATATGCATAACATAACAATAGCTTTTCATAAGTATTGTTTAATGCTTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_336729.p1 GENE.S_Transcript_336729~~S_Transcript_336729.p1 ORF type:3prime_partial len:140 (-),score=-1.04,PIF1|PF05970.10|2.5e-08 S_Transcript_336729:3-419(-)
MSPHCLSSKLNCPVILLRNLNPSVGLCNGTRLICRGFKTNLVICEIATRYRAGDVQDMSFLGSHRIFTPTLFFFFFFGFCICTANLIYNLLMCHVSVQPVHDIYIFGCDHEFLYPVQDTLLLYMHNITIAFHKYCLMLK

Click here to download the sequence:
Link to NCBI Protein BLAST