Transcript Information: S_Transcript_336731.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6782196829111
Replicate 23.4080731836812
Replicate 33.4486417066895
Condition 2: 8 Hour
Replicate 15.027937554446
Replicate 26.1840882418757
Replicate 37.7984808310907
Condition 3: 24 Hour
Replicate 13.5520135757064
Replicate 22.5796208298282
Replicate 32.8708018022083


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_336731.p1 GENE.S_Transcript_336731~~S_Transcript_336731.p1 ORF type:5prime_partial len:123 (+),score=6.39,PIF1|PF05970.10|2.8e-09 S_Transcript_336731:3-371(+)
TTGCTTGGCTTGGTGGTGTGTTGTCGGACATCCTATTTTTCCGGTCTTAAGCTTTGCTTTTCTTCTTCGTTCCTTGGCTTGATTAGAGCTTCCTTTGTTTTAAAAGGAGGAATGAGCCCACATTGTCTAAGTTCAAAGCTTAACTGTCCTGTCATCTTGCTTCGCAATCTAAACCCCTCTGTCGGCCTTTGCAATGGAACTAGGCTTATTTGTCGGGGATTTAAGACAAACCTGGTTATTTGTGAGATAGCAACAAGATATCGTGCTGGTGATGTTCAGGATATGAGCTTTTTGGGCAGCCATAGAATCTTTACACCCACTCTCTTTTTTTTTTTTTTTTTGGGTTTTGTATCTGCACTGCCAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_336731.p1 GENE.S_Transcript_336731~~S_Transcript_336731.p1 ORF type:5prime_partial len:123 (+),score=6.39,PIF1|PF05970.10|2.8e-09 S_Transcript_336731:3-371(+)
LLGLVVCCRTSYFSGLKLCFSSSFLGLIRASFVLKGGMSPHCLSSKLNCPVILLRNLNPSVGLCNGTRLICRGFKTNLVICEIATRYRAGDVQDMSFLGSHRIFTPTLFFFFFLGFVSALPT*

Click here to download the sequence:
Link to NCBI Protein BLAST