Transcript Information: S_Transcript_336808.p1


Annotated TAIR IDAT3G56370.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20899403-20902390 | Reverse length=964
E-Value5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0100454105121
Replicate 21.5997188803032
Replicate 30.72433706672751
Condition 2: 8 Hour
Replicate 10.32213580539476
Replicate 20.60829799926749
Replicate 30.45078831793012
Condition 3: 24 Hour
Replicate 10.98994940289702
Replicate 20.8901194878928
Replicate 30.83819482917304


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_336808.p1 GENE.S_Transcript_336808~~S_Transcript_336808.p1 ORF type:complete len:331 (+),score=31.43,LRR_8|PF13855.2|5e-05,LRR_8|PF13855.2|0.00094,LRR_8|PF13855.2|0.00068,LRR_8|PF13855.2|1.6e-06,LRR_8|PF13855.2|0.031,LRR_8|PF13855.2|0.0013,LRR_8|PF13855.2|6.4e+03,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|0.0077,LRR_4|PF12799.3|63,LRR_4|PF12799.3|8.8,LRR_4|PF12799.3|0.0048,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|9.4e+03,LRR_4|PF12799.3|0.0074,LRR_4|PF12799.3|0.014,LRR_1|PF00560.29|9.7e+03,LRR_1|PF00560.29|18,LRR_1|PF00560.29|3.5,LRR_1|PF00560.29|0.57,LRR_1|PF00560.29|6,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|6.3e+03,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|2.6e+02,LRR_1|PF00560.29|3.3e+03,LRR_1|PF00560.29|7.8,LRR_1|PF00560.29|8.9 S_Transcript_336808:986-1978(+)
ATGATCTCAGGAAAACTTCCAAATAGTATAGGACATCTTGTTACATTAACCGATATGTTCTTCTCCAACAACCGTTTTACAGGGCATATTCCCAAAAGTTTTGGCAATCTCAAGCATATCCAATCCTTGGATTTGTCAAGAAATCAACTCATTAGTCCACTTCCTTCCCAACTTTCTAATCTCAAAATCTTACAGACTTTGGATTTATCATATAATCCACTTGGTCTAGTGAGCATACCAGATTGGTTCTCCAAGCTGAACCTCTTTAGGCTAAGATTAGCCAACACAGGGATCAAAGGGCAACTTCCTCAATGGTTATCCTCAACCTCGATATCATATCTCGATTTATCGAGCAATGATCTCAAAGGGAAGTTGCCTTCTTGGATAGGGAACATGACCAATTTGTCATTCCTTAACATATCCAACAATGGCTTCTACTCTACCATCCCTGAGGCATTCAAGAATCTTACTCTCCTCGCGGACCTTGATATTCATTCCAACAAGTTCTCGGGCCATTTAGGAGTTATATTCGATAAGGACTATCAAGATCCATTAGGTCACTACAACTCCATTGATGTTTCTAACAACAGGTTCACCGGTCCACACGACAACAACGTTGGTAACAAAGTTGTCATGAAGTCTATCAATTCATTAATCTTGTCGAACAATCACTTGGGGGGATCGATACCAAAATTGATAGGAAATTTGACAGAGTTGCGAGTGCTTAAGATGGAGGGTGACGGGCTCTCAGGAAGTATACCTAGTGAACTTGGGAATGCTAAGGAATTAAGGACGGTTTTGTTGTCGAGGAACTGCTTAAGTGGGAGTATTCCAGGGAGTATTTTGAACTTGAATAAATTGGAGGAGTTTGATGTCTCTAGGAATAAACTAAGAGGAGCAATTCCAGCGCACAAGTCTAGGATTCCTGTTTCTGCATTTTTGGGTAATCCTGGCCTTTGTGGAAGCCCATTAGCTCCTTGTAAGAATTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_336808.p1 GENE.S_Transcript_336808~~S_Transcript_336808.p1 ORF type:complete len:331 (+),score=31.43,LRR_8|PF13855.2|5e-05,LRR_8|PF13855.2|0.00094,LRR_8|PF13855.2|0.00068,LRR_8|PF13855.2|1.6e-06,LRR_8|PF13855.2|0.031,LRR_8|PF13855.2|0.0013,LRR_8|PF13855.2|6.4e+03,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|0.0077,LRR_4|PF12799.3|63,LRR_4|PF12799.3|8.8,LRR_4|PF12799.3|0.0048,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|9.4e+03,LRR_4|PF12799.3|0.0074,LRR_4|PF12799.3|0.014,LRR_1|PF00560.29|9.7e+03,LRR_1|PF00560.29|18,LRR_1|PF00560.29|3.5,LRR_1|PF00560.29|0.57,LRR_1|PF00560.29|6,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|6.3e+03,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|2.6e+02,LRR_1|PF00560.29|3.3e+03,LRR_1|PF00560.29|7.8,LRR_1|PF00560.29|8.9 S_Transcript_336808:986-1978(+)
MISGKLPNSIGHLVTLTDMFFSNNRFTGHIPKSFGNLKHIQSLDLSRNQLISPLPSQLSNLKILQTLDLSYNPLGLVSIPDWFSKLNLFRLRLANTGIKGQLPQWLSSTSISYLDLSSNDLKGKLPSWIGNMTNLSFLNISNNGFYSTIPEAFKNLTLLADLDIHSNKFSGHLGVIFDKDYQDPLGHYNSIDVSNNRFTGPHDNNVGNKVVMKSINSLILSNNHLGGSIPKLIGNLTELRVLKMEGDGLSGSIPSELGNAKELRTVLLSRNCLSGSIPGSILNLNKLEEFDVSRNKLRGAIPAHKSRIPVSAFLGNPGLCGSPLAPCKNL*

Click here to download the sequence:
Link to NCBI Protein BLAST