Transcript Information: S_Transcript_33690.p1


Annotated TAIR IDAT5G42310.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16915860-16918238 | Forward length=709
E-Value7E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1414154028633
Replicate 23.2372038854141
Replicate 34.1631458427992
Condition 2: 8 Hour
Replicate 14.5731649664281
Replicate 24.9995779127154
Replicate 33.7531289236762
Condition 3: 24 Hour
Replicate 14.6352574449568
Replicate 23.632349033681
Replicate 34.0423592613166


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33690.p1 GENE.S_Transcript_33690~~S_Transcript_33690.p1 ORF type:complete len:443 (+),score=71.02,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|8e-06,PPR_2|PF13041.2|0.00034,PPR_2|PF13041.2|0.00074,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|5.5e-14,PPR_2|PF13041.2|4.8,PPR_2|PF13041.2|1.6,PPR|PF01535.16|0.0027,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|0.038,PPR|PF01535.16|0.99,PPR|PF01535.16|0.068,PPR|PF01535.16|0.00013,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|6.9,PPR|PF01535.16|9.3e+03,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|2.9e-07,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|40,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|0.00022,PPR_1|PF12854.3|3.2e-09,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|0.0098,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|7.3e-05,PPR_3|PF13812.2|0.00095,PPR_3|PF13812.2|8.7e+03,PPR_3|PF13812.2|31 S_Transcript_33690:432-1760(+)
ATGCCGGCAATTGAATTTCTTTCTTCTCCAAAAATGGAATTCCAATTCATTTCCTCAATTTGCACCCGGTATCCCATTTTCTCACAATTTTCTACTAATTTTCCCAGTAACCCAAATAGACCCAGTATCAATGTTTGCTCTTGCATTCCAATTTGTAAATCTCAATCCCCTAAAACTAATGAGAAGATACCCACTTGTGCTGCTACTTCATTTATGGACTACCCACTTGGAAAAGAGCTATCTTTAGAGTATTATAGTGAAAGTATTAGTAACTTATGTAGGAAAGGATGTGTTGATGAGGCTATGTCATGTTTATCAAAAATGCAAGCATTGGGTTTCCACCCTAATATGTTTTGCTATTCTTGTTTGATTGAGGCTCTTTGTAGAGTTGGTAGAACCCTTGAAGCTGATATGGTTTTCCAAGAAATGATGTTTTTCGGGTTGAGACCGAAAGTTGGGCTTTTTAATGTTTTGCTTAGAGGGTTCTTGAGGAAAGGCATGTTAGAGCTTGGGAGTCGAGTTTTGAGGGCAATGGATGAACTTGGTGTTCATAAGAATCAAGAAACATTTGAGATTTTCTTGGATTATTATGTGAGTGCTGGGAGGTTAAGTGATACCTGGCAGGTTATTGGTGAGATGAAGAAGAAAGGGTATCGGTCTAGTTCATTTGTTTTTAGTCGGATTATTGAACTCTATAGAGATAATGGTATGTGGAAGAAGGCAATGGAGATTATAGGGGATATAAGGGAGTCAGGGGTGCCTGTTGATAGACGGATTTATAATAGCATCGTTGATACGTTTGGTAAATATGGTGAGCTCGAACAAGCCTTGGAAGTTCTTGCCAAGATGCGGAAAGACGGTATAATGCCAGATATAATGACATGGAATTCTTTGATAAAATGGCACTGTAAGGCCGGAGATTATATGAAGGCACTTGATTTGTTCACTGAAATGCAAGATCAAGGATTGTATCCTGATCCGAAGATATTTGTTGTCATGATCAGTCGACTAGGTGAGCAAGGGAAGTGGGATCTGTTGAAAGAGAACTTTGAGAAACTGAAGCGTAGAGGCCATAAAAAGAGTGGAGCAATATATGCAGTTCTAGTTGATATATACGGTCAGTATGGGAGATATCAGGGGGCTGAAGATTGCATATCTGCTTTGAGAGCAGAAGGTATTCAGCTGTCATCTAACATATTTTCTGTATTGGCGAATGCATATGCTCAACAGGTATCACCAATCTCTTTGCATCATAATATGCTGTCTTTTGTTGTTTTACTCCCTTCGTCCCATTTTGATTGCAACATTTGCTTTTGCTTCCTAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33690.p1 GENE.S_Transcript_33690~~S_Transcript_33690.p1 ORF type:complete len:443 (+),score=71.02,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|8e-06,PPR_2|PF13041.2|0.00034,PPR_2|PF13041.2|0.00074,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|5.5e-14,PPR_2|PF13041.2|4.8,PPR_2|PF13041.2|1.6,PPR|PF01535.16|0.0027,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|0.038,PPR|PF01535.16|0.99,PPR|PF01535.16|0.068,PPR|PF01535.16|0.00013,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|6.9,PPR|PF01535.16|9.3e+03,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|2.9e-07,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|40,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|0.00022,PPR_1|PF12854.3|3.2e-09,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|0.0098,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|7.3e-05,PPR_3|PF13812.2|0.00095,PPR_3|PF13812.2|8.7e+03,PPR_3|PF13812.2|31 S_Transcript_33690:432-1760(+)
MPAIEFLSSPKMEFQFISSICTRYPIFSQFSTNFPSNPNRPSINVCSCIPICKSQSPKTNEKIPTCAATSFMDYPLGKELSLEYYSESISNLCRKGCVDEAMSCLSKMQALGFHPNMFCYSCLIEALCRVGRTLEADMVFQEMMFFGLRPKVGLFNVLLRGFLRKGMLELGSRVLRAMDELGVHKNQETFEIFLDYYVSAGRLSDTWQVIGEMKKKGYRSSSFVFSRIIELYRDNGMWKKAMEIIGDIRESGVPVDRRIYNSIVDTFGKYGELEQALEVLAKMRKDGIMPDIMTWNSLIKWHCKAGDYMKALDLFTEMQDQGLYPDPKIFVVMISRLGEQGKWDLLKENFEKLKRRGHKKSGAIYAVLVDIYGQYGRYQGAEDCISALRAEGIQLSSNIFSVLANAYAQQVSPISLHHNMLSFVVLLPSSHFDCNICFCFLK*

Click here to download the sequence:
Link to NCBI Protein BLAST