Transcript Information: S_Transcript_336970.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1655329008108
Replicate 21.9325071145268
Replicate 31.3461851155913
Condition 2: 8 Hour
Replicate 12.8018761000613
Replicate 24.2457522965905
Replicate 34.0453433410913
Condition 3: 24 Hour
Replicate 12.3917755646636
Replicate 22.3160099421085
Replicate 31.8410251390596


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_336970.p1 GENE.S_Transcript_336970~~S_Transcript_336970.p1 ORF type:complete len:137 (+),score=25.39,zf-RVT|PF13966.2|6.4e-12 S_Transcript_336970:860-1270(+)
ATGCTGAAAGTGAGGGATGGCTTTACTGTTGTTGGTGCAAATATGGCTGTAGATATGTTGAACGAATGGGCTGAGGCTGGTAAAGTGTTTGCTAATGCTTATAAGAAGTTCAGAGGTGAGATGACAGTTAAAAGATGGGCTAAAGTTGTCTGGAATCAAGCAATTATGCCTAAATATTCAGTCATAGCTGTTATGGCTCTTTCAAATGGCTTGCCTACTCTAGACAACTTAGTGAAGCGAGGATTACACCTTGTTAACAGATGTGAACTGTGTTGCTGTCAGCAAGAGAACATTTACTCATTTGTACTTCAAATGTATATATGTTCAGGCAGTGTAGAGGACTGTATTAAATTGGATCCGAATCTACAGAAGAGTTTTAAGCCTCAAGAGAGAGATGAAATGGTTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_336970.p1 GENE.S_Transcript_336970~~S_Transcript_336970.p1 ORF type:complete len:137 (+),score=25.39,zf-RVT|PF13966.2|6.4e-12 S_Transcript_336970:860-1270(+)
MLKVRDGFTVVGANMAVDMLNEWAEAGKVFANAYKKFRGEMTVKRWAKVVWNQAIMPKYSVIAVMALSNGLPTLDNLVKRGLHLVNRCELCCCQQENIYSFVLQMYICSGSVEDCIKLDPNLQKSFKPQERDEMVP*

Click here to download the sequence:
Link to NCBI Protein BLAST