Transcript Information: S_Transcript_336970.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0731048885153
Replicate 20.35585144447604
Replicate 30.89239045565809
Condition 2: 8 Hour
Replicate 10.68791581668171
Replicate 22.1650176102961
Replicate 30.34380399362873
Condition 3: 24 Hour
Replicate 10.88084207623364
Replicate 20.91386337001401
Replicate 31.2204215034734


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_336970.p2 GENE.S_Transcript_336970~~S_Transcript_336970.p2 ORF type:5prime_partial len:124 (+),score=17.55,RVT_1|PF00078.23|7.7e-19 S_Transcript_336970:3-374(+)
CCTAAAGAATACTTTGAAGGGAAGTGTGGTCTAAGGCAAGGAGATCCTATTTCTCCCTATATTTTTGTGCTGTGCATGGAAGGCTTCTCTAGGATGATGAGAAAAGCTAGCACTGTGCCAGAGTTCTCCTTCCACCCTAAGACTGTAAGAGTGAAGATAAACTATATTATTTTTGCTGATGACCTTCTACTTTTTTCCAGAGGGGATATCCCTTCTTTAAAGGTTGTGCTGAATCGTCTTCAGGCATTTTCCAAAATGTCTGGACTTCATATTAATTTAGAAAAGTCTGAGGTGTACATGGGGGCGTGTCTTCAGATATTCAGTAGCAGATCCTGGCAACTACTGGCTTTGTTAAGGGGTTATTACCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_336970.p2 GENE.S_Transcript_336970~~S_Transcript_336970.p2 ORF type:5prime_partial len:124 (+),score=17.55,RVT_1|PF00078.23|7.7e-19 S_Transcript_336970:3-374(+)
PKEYFEGKCGLRQGDPISPYIFVLCMEGFSRMMRKASTVPEFSFHPKTVRVKINYIIFADDLLLFSRGDIPSLKVVLNRLQAFSKMSGLHINLEKSEVYMGACLQIFSSRSWQLLALLRGYYL*

Click here to download the sequence:
Link to NCBI Protein BLAST