Transcript Information: S_Transcript_33702.p1


Annotated TAIR IDAT1G65070.2
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24173047-24176244 | Reverse length=876
E-Value1.8E-307
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.241497882052
Replicate 230.191185710283
Replicate 335.389022090242
Condition 2: 8 Hour
Replicate 145.152772699982
Replicate 247.343934073106
Replicate 341.159218895145
Condition 3: 24 Hour
Replicate 129.892998460813
Replicate 228.603121846903
Replicate 329.812898978854


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33702.p1 GENE.S_Transcript_33702~~S_Transcript_33702.p1 ORF type:complete len:912 (+),score=180.45,MutS_V|PF00488.17|6.7e+03,MutS_V|PF00488.17|6.7e-34,Smr|PF01713.17|9.3e+03,Smr|PF01713.17|5.9e-09 S_Transcript_33702:43-2778(+)
ATGGAGCTCAAGCTATCACTCAAGTTTTCCTCCCTCACTCCCCTCCCCCTACGCTTCCCTTTCCACCACCGCAAAACTCGCCACCTCCACCATCGAAACCTCCGCCTCCCGTTTCCCTTCCATTTTTCTCTCTCCTCCAACCCTACAAACCCCACCAACCTCTCCCAAGAGCTCCAATCAGAAACCCTAGAAACCCTAGAATGGAATCGCGTATGCAAGCAGCTCATCCCCTTCACTTCCACCTCAATGGGCCTATCCACGGCCCAAACAGCCTCCATCCCCATGGGCCGGACTTTAGAGGAGAGCCAGAGGCTGCTGGCCCAGACAACTGCCGCATTGGGCCTTCCCAGCTCGCTGGACTTCTCCGGAATTGAGGATGTCTCGAAGATTGTGAGTTCGGCAGTTTCCGGTGAGCTTTTGTCGATCGGTGAGCTTTGTGTGGTTCAGAGGACGTTGAGGTCTGCCAGGAGGTTGTTTGAGCAGTTGGAGTTTTCCTCCAATGGTGATCATTCCTCTGTGAGGAGCTATCCATTGCTTGAGATTCTTGAGAGTTGCAACTTCCTGGTTGAATTGGAACAGAAGATAGAATTTTGTGTAGATTGTAACCTTTCAGTAGTGTTGGATAGAGCTAGTGATGACTTGAAGACTATTAGGTCAGAAAGGAGAAAGAACATGGATATTTTGGGTTCTCTTTTAACGAGCATTTCAAATAAGGTATTTCAAGTTGGGGGCATCGATAAACCTTTGGTTACAAGTCGTAGGTCAAGGATGTGTGTTGGTATCAGAGCCTCTCGTAGATCCTTGCTTCCAGGTGGAGTGGTTTTAGACGTAAGTAGTTCTAGAGCTACGTTCTTTATGGAACCCAAAGAGGCAGTGGACTTAAATAACATGGAAGTGTGGTTGGCAAATTCTGAGAAGGATGAGGAACGGGCCATCTTGAGCTTACTAACATCAGAACTAGGAAAGTCAGCAGCAGATATCAATTATTTGTTGGATAGAATACTGGAGATTGACCTCGCTGTTGCAAGAGCTCGTTATGCTAAGTGGTTAGACGGGGTTTGTCCAACTCTAAATTCAGGTAATGAAGATGATTTCTTTTTGGTGGACATTGAAGGTGTGCGGCATCCTCTGTTGCTTGAGTCATGCTTAGGTAGTTTAGAAGCTGTTCCTGGTTCTGGAAAATCAGAACAGTTTAATGAGGGAGCTGGTGTTAGAAGCGTCAGAGAGCTGCCTGATGAAGCGCCAAGTCGCCCTGTTCCGATAGACATCAGAATTAGATGTAGAACAAGTGTGGTAATTATCTCAGGACCTAATGCAGGTGGCAAAACTGCTTCAATGAAGACGCTGGGCTTGGCATCTTTGATGTCAAAAGCTGGCCTGTATTTGCCTGCTAAAGGCCTACCTAAATTGCCTTGGTTTGATCTTGTTCTGGCTGATATAGGGGATCATCAGTCTCTGGACCAAAGCCTTTCTACTTTCAGTGGTCACATAGTGCGAATTGGCAAGATCTTGGAGGTGGTTTCCAGCGATTCACTTGTCCTCTTTGATGAAATTGGGAGTGGCACTGATCCTTCGGAGGGGGTGGCCCTTTCTGCAAGCATCTTACAATATCTCAAAGATAGAGTAAATTTAGCTGTGGTAACTACACATTATGCTGATTTAAGCTGTCTGAGGGAGATGGATGCCAGATTTGAAAATGCAGCTATGGAATTCTCTCTGGAAACGCTGCAGCCTACCTACCAGGTTCTATGGGGGTCTGCTGGTGAATCAAATGCCTTGAAAATTGCTAGAAGAATTGGCTTTGACAATAAAATTATTGATCGTGCAGAAAATTGGCTGGAGAGGTTGGTGCCAGAAAAGCAGGCACAGCGAAAAGGCGCACTATATGAATCTTTATTAGAAGAGAGAAATAAGATGGCTGACCGGGCTAGTCAAGCAGCTTCCCTTCATTCTGATGTTATGTTACTATATAATGAGATTGAGAGGGAGGCGCATGATCTTGATTGGCGTGAGAAGGCATTGATTACGAAGGAGACCCAGCAAGTAGAACAAGAACTTGAGAATGTGAAATCTAAAATAGAAGCTGTGGTGCAAGAGTTTGAGGATCAATTAAGAACCATGGATGTCAATCAATATGGTTTTCTCATTAGAAAGGCTGAATCGGCAATTGCATCCATTGTTAAAAGCCACAATCCTGCAATGAATTTGGTTTCCGAAGAGATGGAAAGTTTGCATACACCTCAGCCTGGTGAACAGGTCCATGTAAAGCGTTTAGGAGGTAAGCTAGCTACTGTAGTTGAGGTGTCTGAAGATGATGGGACTGTTCTGGTTCAACAAGGAAAAGTAAGATTTCGGGTGGATAAAAGTGGCGTTCAAGCTGTACAACAATGCAATGCAGCTAGTTCATCCCTACGCATGAAAAAACAGGTTCGTATATCTGGAAATTCAGAAGAGGGCGTCGAAAGGAAAGATGAGGAAATGTCTTATGGACCAATGATACAGACATCAAAAAATACTATCGATCTACGTGGTATGAGGGTTGAGGAAGCTTGTCATGCGCTTGATATAGCCATAGCTGGAAGAGCTCCTCATTCTCTTCTTTTTATCGTACATGGAATGGGCACTGGGGTTGTCAAAGAACGCGTGGTTGAGATGCTGAAGAACCATCCACGTATTGAGAAGTTTGAACAGGAAAGTCCAATGAACTACGGCTGTACAGTAGCATTTATCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33702.p1 GENE.S_Transcript_33702~~S_Transcript_33702.p1 ORF type:complete len:912 (+),score=180.45,MutS_V|PF00488.17|6.7e+03,MutS_V|PF00488.17|6.7e-34,Smr|PF01713.17|9.3e+03,Smr|PF01713.17|5.9e-09 S_Transcript_33702:43-2778(+)
MELKLSLKFSSLTPLPLRFPFHHRKTRHLHHRNLRLPFPFHFSLSSNPTNPTNLSQELQSETLETLEWNRVCKQLIPFTSTSMGLSTAQTASIPMGRTLEESQRLLAQTTAALGLPSSLDFSGIEDVSKIVSSAVSGELLSIGELCVVQRTLRSARRLFEQLEFSSNGDHSSVRSYPLLEILESCNFLVELEQKIEFCVDCNLSVVLDRASDDLKTIRSERRKNMDILGSLLTSISNKVFQVGGIDKPLVTSRRSRMCVGIRASRRSLLPGGVVLDVSSSRATFFMEPKEAVDLNNMEVWLANSEKDEERAILSLLTSELGKSAADINYLLDRILEIDLAVARARYAKWLDGVCPTLNSGNEDDFFLVDIEGVRHPLLLESCLGSLEAVPGSGKSEQFNEGAGVRSVRELPDEAPSRPVPIDIRIRCRTSVVIISGPNAGGKTASMKTLGLASLMSKAGLYLPAKGLPKLPWFDLVLADIGDHQSLDQSLSTFSGHIVRIGKILEVVSSDSLVLFDEIGSGTDPSEGVALSASILQYLKDRVNLAVVTTHYADLSCLREMDARFENAAMEFSLETLQPTYQVLWGSAGESNALKIARRIGFDNKIIDRAENWLERLVPEKQAQRKGALYESLLEERNKMADRASQAASLHSDVMLLYNEIEREAHDLDWREKALITKETQQVEQELENVKSKIEAVVQEFEDQLRTMDVNQYGFLIRKAESAIASIVKSHNPAMNLVSEEMESLHTPQPGEQVHVKRLGGKLATVVEVSEDDGTVLVQQGKVRFRVDKSGVQAVQQCNAASSSLRMKKQVRISGNSEEGVERKDEEMSYGPMIQTSKNTIDLRGMRVEEACHALDIAIAGRAPHSLLFIVHGMGTGVVKERVVEMLKNHPRIEKFEQESPMNYGCTVAFIK*

Click here to download the sequence:
Link to NCBI Protein BLAST