Transcript Information: S_Transcript_337035.p1


Annotated TAIR IDAT1G20693.1
Annotated Gene Namehigh mobility group B2
Annotated Gene Symbol(s)HMGB2, HMG BETA 1, NFD2, NFD02
Annotation TypeOrtholog
Chromosome Positionchr1:7177282-7178487 | Forward length=144
E-Value2.4E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78273533044649
Replicate 20.81113196902628
Replicate 31.220475182003
Condition 2: 8 Hour
Replicate 11.7248477462387
Replicate 21.8094877576249
Replicate 31.4106075620943
Condition 3: 24 Hour
Replicate 10
Replicate 21.1665197134885
Replicate 30.74182483544459


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_337035.p1 GENE.S_Transcript_337035~~S_Transcript_337035.p1 ORF type:complete len:136 (+),score=53.90,HMG_box|PF00505.15|8.6e-23,HMG_box_2|PF09011.6|5.8e-16 S_Transcript_337035:319-726(+)
ATGAAAGGCGGAAAATCCAGCGTTAGTGGTAGAAATGACAACAAGTTGTCAGTGAAGAAGAAGGCGGTGAAGAAAGGAAAGGACCCTAACAAGCCTAAGAGGCCTCCTAGCGCCTTCTTCGTCTTCATGGAAGATTTCAGGAAGACTTTCAAGGAGAAGCATCCTAACAACAAATCAGTTGCCGCTGTCGGAAAAGCTGGTGGCGAGAAATGGAAGTCGTTGACCGAAGTTGAGAAAGCTTCTTACATTGAAAAGGCAGATAAGAAGAAGAAAGAGTACGAGAAAAACATGAATGCTTACTACAAGAAACAGGCTGAGGGACCTGGAGATGATGATTCTGACAAGTCCAGATCTGAGGTCAATGATGAGGAAGGCAGTGGAGAGGAGGAAGAAGAGGATGATGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_337035.p1 GENE.S_Transcript_337035~~S_Transcript_337035.p1 ORF type:complete len:136 (+),score=53.90,HMG_box|PF00505.15|8.6e-23,HMG_box_2|PF09011.6|5.8e-16 S_Transcript_337035:319-726(+)
MKGGKSSVSGRNDNKLSVKKKAVKKGKDPNKPKRPPSAFFVFMEDFRKTFKEKHPNNKSVAAVGKAGGEKWKSLTEVEKASYIEKADKKKKEYEKNMNAYYKKQAEGPGDDDSDKSRSEVNDEEGSGEEEEEDDE*

Click here to download the sequence:
Link to NCBI Protein BLAST