Transcript Information: S_Transcript_33712.p1


Annotated TAIR IDAT4G02070.1
Annotated Gene NameMUTS Homolog 6
Annotated Gene Symbol(s)MSH6, MSH6-1, ATMSH6
Annotation TypeOrtholog
Chromosome Positionchr4:906079-912930 | Forward length=1324
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.816816736045
Replicate 213.618181754109
Replicate 313.043841329929
Condition 2: 8 Hour
Replicate 117.034502401583
Replicate 215.704293144982
Replicate 315.092007078867
Condition 3: 24 Hour
Replicate 113.153197623686
Replicate 212.189084743406
Replicate 312.916281438929


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33712.p1 GENE.S_Transcript_33712~~S_Transcript_33712.p1 ORF type:complete len:1322 (+),score=333.07,MutS_V|PF00488.17|1.1e-78,MutS_I|PF01624.16|4.2e-34,MutS_III|PF05192.14|1.1e-31,MutS_IV|PF05190.14|9e+03,MutS_IV|PF05190.14|5.6e-15,MutS_II|PF05188.13|8.7e+02,MutS_II|PF05188.13|7.6e-06 S_Transcript_33712:338-4303(+)
ATGGCACCTTCTTCACGCAAGAACCTCAATGGCCGCTCCCCATTGGTCAACAAACAACACCAAATTACCGCCTTTTTCTCCAAATCTTCTTCTCTTAACCCAAAACCTAAACCTAACCCTAGCCGTAACCCTAATCCTAAACCTAGCATTAGCCCAGGTTCCTCCCCTCCCACCACCCCTTCCCCTCTCAACACGAAATCGAAGCCCCATTCAGCCAAACCCAAGCCCCAATTGATCATCGGGTCAAGTAAGAGCGTATTTGGGGAAGAAGTGTTGAACAAGAGGATTAGGGTTTACTGGCCTTTAGACAAGGAGTGGTACGAGGGTTGTGTCAAGTCGTTCGATAAGGATTCCGGTAAGCATTTGGTGGCATATGATGATGCTGAGGAGGAATTGCTTGATCTCTCTAAGGAGAAGTTTGAGTGGCTTGATGACGTTGAGGGGTCTGTTAGGAAATTCAGGAGGTTGAGGAAGGTTTCTGTCATTTTAGACGACGATGACGAGGAGGAGGGGGAGTTAAATGGGGGAAATGTGGGTCCCGAGGATGATGATGATTCGAGTGACGAGGATTGGGGGAAGAATGCGGTGGTCGAGGATGAGGAGGAAGATGGAGGGGATTGTTTGGAGGATATGGAGTTGGAGGATGAGGAGAAGGAGAAGGAGGGAAAGAAGTTGAAGAGAAAGAGGGGAGAGAGTGCTGGAGGGACGGTAAAGAAGGTTAAGGTTGGTGGTGGGGAGAGAAATGAGGGTGGTTCGAGTAAGGAGAAGAAAGGCGGGTTTGTTTTCGGGGAGTTTGGGAGCAAGGCCGGGAAGCCAGTTGTTAATAATGGTCAAGGTCAAGAGGCAAAGTCACCTAATGTTGTTGACAATGTCATTAACTCTGATGCACTCGATAGGTTTGGTAACCGCGAAGAAAAGAAGCTTCCATTCCTTGGCAAAGATCGAAGGGATGCAAAAAGGAGACTTCCCGATGATCCAAATTATGATCCAAGAACTCTTTACTTGCCCCCTCATTTTCTGAAAAGTCTGACCGGCGGTCAGAGACAATGGTGGGAGTTCAAATCAAACCATATGGACAAGGTTCTATTTTTTAAGATGGGGAAATTTTATGAGCTTTTTGAAATGGATGCACATATTGGTGTGAAAGAACTTGATCTGCAGTATATGAAGGGTGAACAACCTCATTGTGGATTCCCAGAAAAGAACTTCTCGGTCAACCTGGAAAAACTGGCTAGAAAGGGTTATCGAGTCCTCGTAGTGGAGCAGACTGAAACCCCAGATCAACTTGAGATCCGTCGTAGAGAAGAGGGTTCAAAAGACAAGGTGGTCAAGCGGGAAATATGTGCTGTGGTAACTAAAGGAACATTGACTGAAGGGGAAATGTTGTCCGCAAATCCCAATGCTTCTTATATCGTGTCAGTAAATGAAGGTGATCCAACATTGTCAAATAATAAAGATGAGCATCTATATGGTGTTTGTGTTGTTGATGTCGCTACGAGCCATATTATTGTTGGGCAGATAAAGGATGATGTCGAATGCAGCACTTTATGCTGTCTTCTGTCTGAACTACGACCTGTTGAAATTATTAAACCCATGAAGAGGCTTAGTCTTGAGACTGAGAAGGCAATCAGCAGATACACACGAAACCCTCTTGTTAATGAGTTGGTTCCAGGTTCAGAATTCTGGGATGCTGAAAGAACTATATGTGAACTCAAGACTTTTTACAGTCGCTTCAATGATTCGTCTAGATCTTCGCCTGAAGAAGCTTCGGTAGCAGTCAATGGCTCCAGTAATGAGGACAAGGGCTGTTGCCTGCCAGATGTTCTGAAGGAGCTGTTCAGTGCTGGTCCTGATGGTAGTCTTGCATTGTCAGCTCTTGGAGGCACTCTGTACTACTTGAGACAGGCTTTCCTGGATGAGACGTTGCTTAGATATGCAAAATATGAACCACTTCCCTGTTCTGGTTTCTGTGATGTTTCCAAAAAATCTTACATGGTGCTAGATGCAGCTGCTTTGGAAAACCTTGAAATATTTGAGAACAGTAGAAATGGGGATTCCTCAGGGACATTATATTCCCAACTTAACCATTGTGCCACAGCATTTGGGAAGAGGTTGCTTAAAGCATGGCTTGCAAGACCTCTGTATCACACGGAGTCTATAAAGGAACGACAGGATGCAATAGCAGGCCTTAAGGGCCCTAATTTGTCTGTTGCACTTGAATTTCGGAAAGATCTGATGAAGTTACCTGATATGGAGAGGTTGCTCACACGGCTATTTTCTAGCAGTGAAGCTCATGGAAGAAATTCAAATAAGATTGTGCTCTATGAAGATGCTTCAAAAAAACAGCTTCAAGAATTTATTTCAACTCTGCGTGGTTGTGAAGTCATGACCCTAGCTTGTGCTTCTCTTGGATCCATATTGGACAATACTGATTCAGCATTGTTACATCATCTGCTAATTCCTGGGGAAGGTCTTCCTGATGTGAATTCCATTGTAGAGCAATTTAGGGATGCCTTTGACTGGGTAGAAGCCAACAGTTCAGGTCGTATAATCCCGCATGAAGGAGTTGATGAAGAATATGACTCTGCTTGTAAGAAGATCGAGGATGTTAGTTTGAACTTGAAGAAGCACCTAAAGGAACAAAAATCAATACTTGGCGATACATCGATAACATATGTTACAGTTGGAAAGGACACTTATCTCTTACAAGTGCCTGAAAGTATGTGTCAAAGTATTCCTCAAGATTATGAGTTACGATCATCCAAGAAGGGTTTTTCCAGATATTGGACCCCATATATCAAAAAGATGTTAGGAGAGTTGACGCAGGCTGAATCTGTGAAGGAATCCAGGTTGAAAAGAATGCTGCAGAGGTTGATTGGGCGGTTTTGTGAGCATCACACAAAGTGGAGACAGTTGGTTACAACTGTTGCAGAATTAGATGTTTTGATCAGCTTGGTAATAGCAAGTGACTATTATGAAGGACCTACATGCCGGCCAATTATTTCAACTCACTCAAACCCTAATGAAGTGCCACATTTGACAGCCAAAAGCTTGGGGCATCCTATCATCAGAAGCGATTCCTTAGGCAAGGGTACATTTGTTCCAAATGACATTAATATCGGTGGCACGGATCATGCCTCCTTTATCTTGCTTACTGGTCCTAACATGGGTGGAAAGTCAACTCTTCTTCGACAAATTTGCTTGGCTGTAATTCTGGCACAGGTTGGAGCGGATGTCCCTGCAGAAAAGTTTCAGCTATCACTTGTTGACCGAATCTTTGTTCGTATGGGGGCAAAAGATCACATTATGGCAGGACAGAGCACATTCTTGACAGAGCTTTCAGAAACAGCTTCTATGTTGACATCTGCTACCCGTGATTCATTGGTGGCTTTGGATGAACTTGGCCGTGGCACCTCAACCTCAGATGGACAAGCCATTGCGGAATCAGTCCTTGAACATTTTGTCTGCAAAGTGCAGTGTCGGGGAATGTTCTCCACTCATTATCATCGGTTAGCAATTGACTATAAAGAAGATACCAAGGTCTCTCTATGCCATATGGCATGTCAGGTAGGAAAAGGAGATAGAGGTTTGGAAGAAGTCACATTTCTTTACAGGCTGACTCTAGGTGCATGTCCTAAAAGCTATGGTGTCAATGTTGCACGATTAGCTGGCATCCCTGACTCTGTATTGAGTAAAGCTGCTGCCAAGTCGAGAGAATTCGAGGCAAGTTATGGTAGGCAGCGTGAAGCTGCTGCCAAGTCGAGAGAATTCGAGGCAAGTTATCGTAGGCAGCGTGAAATATGCAACAAGAGTTTGCCGAGTTGGGAGAAAGAGGCTTTTGGCTTCATTCAAGATCTGGTTGGTTTTGGTCCAAATGCCAGTTCATATAAGATGGACTGTAACACAAGTATTAGTTCACTTTATCAACTTCAGCACAGGGCTCGGATTCTTCTGGAGCAATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33712.p1 GENE.S_Transcript_33712~~S_Transcript_33712.p1 ORF type:complete len:1322 (+),score=333.07,MutS_V|PF00488.17|1.1e-78,MutS_I|PF01624.16|4.2e-34,MutS_III|PF05192.14|1.1e-31,MutS_IV|PF05190.14|9e+03,MutS_IV|PF05190.14|5.6e-15,MutS_II|PF05188.13|8.7e+02,MutS_II|PF05188.13|7.6e-06 S_Transcript_33712:338-4303(+)
MAPSSRKNLNGRSPLVNKQHQITAFFSKSSSLNPKPKPNPSRNPNPKPSISPGSSPPTTPSPLNTKSKPHSAKPKPQLIIGSSKSVFGEEVLNKRIRVYWPLDKEWYEGCVKSFDKDSGKHLVAYDDAEEELLDLSKEKFEWLDDVEGSVRKFRRLRKVSVILDDDDEEEGELNGGNVGPEDDDDSSDEDWGKNAVVEDEEEDGGDCLEDMELEDEEKEKEGKKLKRKRGESAGGTVKKVKVGGGERNEGGSSKEKKGGFVFGEFGSKAGKPVVNNGQGQEAKSPNVVDNVINSDALDRFGNREEKKLPFLGKDRRDAKRRLPDDPNYDPRTLYLPPHFLKSLTGGQRQWWEFKSNHMDKVLFFKMGKFYELFEMDAHIGVKELDLQYMKGEQPHCGFPEKNFSVNLEKLARKGYRVLVVEQTETPDQLEIRRREEGSKDKVVKREICAVVTKGTLTEGEMLSANPNASYIVSVNEGDPTLSNNKDEHLYGVCVVDVATSHIIVGQIKDDVECSTLCCLLSELRPVEIIKPMKRLSLETEKAISRYTRNPLVNELVPGSEFWDAERTICELKTFYSRFNDSSRSSPEEASVAVNGSSNEDKGCCLPDVLKELFSAGPDGSLALSALGGTLYYLRQAFLDETLLRYAKYEPLPCSGFCDVSKKSYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCATAFGKRLLKAWLARPLYHTESIKERQDAIAGLKGPNLSVALEFRKDLMKLPDMERLLTRLFSSSEAHGRNSNKIVLYEDASKKQLQEFISTLRGCEVMTLACASLGSILDNTDSALLHHLLIPGEGLPDVNSIVEQFRDAFDWVEANSSGRIIPHEGVDEEYDSACKKIEDVSLNLKKHLKEQKSILGDTSITYVTVGKDTYLLQVPESMCQSIPQDYELRSSKKGFSRYWTPYIKKMLGELTQAESVKESRLKRMLQRLIGRFCEHHTKWRQLVTTVAELDVLISLVIASDYYEGPTCRPIISTHSNPNEVPHLTAKSLGHPIIRSDSLGKGTFVPNDINIGGTDHASFILLTGPNMGGKSTLLRQICLAVILAQVGADVPAEKFQLSLVDRIFVRMGAKDHIMAGQSTFLTELSETASMLTSATRDSLVALDELGRGTSTSDGQAIAESVLEHFVCKVQCRGMFSTHYHRLAIDYKEDTKVSLCHMACQVGKGDRGLEEVTFLYRLTLGACPKSYGVNVARLAGIPDSVLSKAAAKSREFEASYGRQREAAAKSREFEASYRRQREICNKSLPSWEKEAFGFIQDLVGFGPNASSYKMDCNTSISSLYQLQHRARILLEQC*

Click here to download the sequence:
Link to NCBI Protein BLAST