Transcript Information: S_Transcript_33743.p1


Annotated TAIR IDAT1G77360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29071983-29073536 | Reverse length=517
E-Value4E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.731048885153
Replicate 212.232393403864
Replicate 311.377978309641
Condition 2: 8 Hour
Replicate 113.328368948208
Replicate 215.290436872716
Replicate 315.084400220461
Condition 3: 24 Hour
Replicate 113.653052181621
Replicate 212.748394011695
Replicate 313.373785642229


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33743.p1 GENE.S_Transcript_33743~~S_Transcript_33743.p1 ORF type:complete len:496 (+),score=115.54,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|0.00062,PPR_2|PF13041.2|0.69,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|8,PPR_2|PF13041.2|33,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.037,PPR|PF01535.16|26,PPR|PF01535.16|0.12,PPR|PF01535.16|0.021,PPR|PF01535.16|0.39,PPR|PF01535.16|0.0024,PPR|PF01535.16|1.3e+02,PPR_1|PF12854.3|19,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.0045,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|18,PPR_1|PF12854.3|4.3e-06,PPR_1|PF12854.3|85,PPR_1|PF12854.3|41,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|13,PPR_3|PF13812.2|6.6e+02,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|26,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|3.1e+02 S_Transcript_33743:451-1938(+)
ATGGCTGAAAGTTCTAGCTTTTTTAAATACTCTTCATCAACTATCCCATACGTATCTAAACCCCAATACCCAGAAAAATTAGACCATGAAAATCAAAGGAGGAAAAAATTCATGACTTATCTCGATGTTCCTTATGTGACCCCTAGAATTAGAATTCTATGTGATATAATTGCTGAAACTCCACCTTCTGAGGTTGAAAATGCTCTTCTTAGTAGTGGTATCACTCCAATCACCGAGCTTGTTGAGGATGTCCTTAAGTTCTCCTATGGCAGCCCTGATGCTGCTGTCATCTTCTTTCGTTGGGCCGGGTTCCACCACAAGCCTTCTGTTTATGCTTGGAATATGATGGTTGATTTGCTAGGCAAGAATGAGAAGTTTGACAAAATGTGGGATGCCATTCGCTCTATGAAGCGAGAAGGGCTGGTTTCCCTCGCCACCTTTGTGTCTGTGTTTGGTAGCTATTGTGAGGTGGGCAGGTCTGAGGATGCGATCATGACATTTGAAGTGATGGATAAGTATGGCATTGAGCCCGACGTGGTTGCTGTGAACTCCTTGTTGAGCGCCATGTGCCAGGAGAAGGATCAAGTCCAGAAGGCGTATAGTTTCTTTGACAAGATCAAGGTGAAGATTCCACCTGATGGGGACTCGTTTGCAATTCTCTTGGAGGGTTGCGAGAAGGAGGGGAATGTTACCAAGGCCAAGGCTACATTTGGGGAGATGGTGGTTCGTGTTGGCTGGGATGCCAAGAATATGCTGGCTTACAATGCTTTTTTAATGACTCTTGTTCGTGGATCACAAGTTGATGAGGCTATCAAGTTTCTCCATGTTATGAAGGGGAAAGGCTGCTTGCCAGGTTTGAAATTCTTTTCCCACACTCTTGATATTCTTGTTAAGCAGAACGATTCTTCCCATGCTGGTCCCTTGTGGGATACAATGGTGGGGAGCGGCATAATGCCTAATTTGATCATGTTCAATGCCATCATTGGCCTGGTTTGCTACAACAATGACATAGACAATGCCTTCCGCTTCCTTGACGACATGCCATTCTATGGAGTTTTCCCTGAATCTCTAACTTATAACATGATCTTCAAATGTCTGATAAACAACAAGAAGGTTCGTGAGGTGGCCTCCTTTTTCAAAGAGATGGTGAAGAATGAATGCCCTCCAACACATGCCAATTGTGCTGCAGCAATAGAGATGCTGTTCAATCGGGATGATCCAGAGACAGGAATTGAGATTTGGGACTATGTGCTTGATAATAATGTCATGCCTATTGATGAGAGTGCAAATATGCTGCTCCTTGGGCTTTGCAAGATAGGTCGTTTCTCAGAATTGAGGAGGTTTGCCACTGACGTGCTGGATCAAAGGATTATCATTCATGGAACCACAATGGAAAAACTGCGCAATGCATTCTACAAAGAAGGCCGAAGTGCGAGGGATACATTCGACAGTCTTGAGAGAAGGTGGAAGGCTTCATACCCTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33743.p1 GENE.S_Transcript_33743~~S_Transcript_33743.p1 ORF type:complete len:496 (+),score=115.54,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|0.00062,PPR_2|PF13041.2|0.69,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|8,PPR_2|PF13041.2|33,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.037,PPR|PF01535.16|26,PPR|PF01535.16|0.12,PPR|PF01535.16|0.021,PPR|PF01535.16|0.39,PPR|PF01535.16|0.0024,PPR|PF01535.16|1.3e+02,PPR_1|PF12854.3|19,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.0045,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|18,PPR_1|PF12854.3|4.3e-06,PPR_1|PF12854.3|85,PPR_1|PF12854.3|41,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|13,PPR_3|PF13812.2|6.6e+02,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|26,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|3.1e+02 S_Transcript_33743:451-1938(+)
MAESSSFFKYSSSTIPYVSKPQYPEKLDHENQRRKKFMTYLDVPYVTPRIRILCDIIAETPPSEVENALLSSGITPITELVEDVLKFSYGSPDAAVIFFRWAGFHHKPSVYAWNMMVDLLGKNEKFDKMWDAIRSMKREGLVSLATFVSVFGSYCEVGRSEDAIMTFEVMDKYGIEPDVVAVNSLLSAMCQEKDQVQKAYSFFDKIKVKIPPDGDSFAILLEGCEKEGNVTKAKATFGEMVVRVGWDAKNMLAYNAFLMTLVRGSQVDEAIKFLHVMKGKGCLPGLKFFSHTLDILVKQNDSSHAGPLWDTMVGSGIMPNLIMFNAIIGLVCYNNDIDNAFRFLDDMPFYGVFPESLTYNMIFKCLINNKKVREVASFFKEMVKNECPPTHANCAAAIEMLFNRDDPETGIEIWDYVLDNNVMPIDESANMLLLGLCKIGRFSELRRFATDVLDQRIIIHGTTMEKLRNAFYKEGRSARDTFDSLERRWKASYPL*

Click here to download the sequence:
Link to NCBI Protein BLAST