Transcript Information: S_Transcript_33743.p2


Annotated TAIR IDAT4G17100.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9610164-9612513 | Reverse length=437
E-Value2.4E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.239487992697
Replicate 217.814038900267
Replicate 315.447396116426
Condition 2: 8 Hour
Replicate 134.684683555244
Replicate 232.649403235239
Replicate 337.141998959028
Condition 3: 24 Hour
Replicate 117.232622707197
Replicate 217.878644863012
Replicate 319.838220541379


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33743.p2 GENE.S_Transcript_33743~~S_Transcript_33743.p2 ORF type:complete len:431 (+),score=94.27,XendoU|PF09412.6|5.9e-95 S_Transcript_33743:2078-3370(+)
ATGGAGGGCTTAATCAAGGGTTTGGTAGACGTGGCTATTGGCCACGATGGCAGGGATGATGATGACAACAACAACAACAACAACAACAATCAATTTCACCGCAATTCTGAGTCACTTGAAGAACGTTCTAGATCCACCTGGGCAGAGGTGGTTTCTGGAGATCAAGATAACGACGATCCAGATAGAAATCGATATGACGATGATCGAAGACGTAATCGCCCTAACAGAATGGGTTATGGAGATGGTGATGCTGATGCTGATCAGTATTCAGAGTTCAGTGAATCGAGGCCTAGTTCTCGCCCTCATCATCAGGAAGTAGGGGAAGCCACTGATGGTTGGCAAACTGCCGGCAAGAAGCATCACAAGCAACCACAGAAGATACATATGGACCATTGGAATTCGTACAAAAGACCTCCCAGTGAGCAGGAATACTCTGAGGAAGTCAGTCAAGTTGCTGAACTGGAGCCATCTGAAGCGGAGCTTGCTGACTATAAAAGTGCCTGTGCAAAGCTTTGGGAACTAGATTTCAACCGCTTGGTTCCTGGTAAGGATTATGAAATTAATGTTGGTGAGGGCAAGAGGGTCCATGACAGGGGAGATATGGCAGATGAAAATCTCTTTACCTGGGTCAGTGAAGATGTACTCAGAAGGCCTACATTTTCTCGTTTCTGTGCCCTCCTGGACAATTACAACCCCAATCAAGGATGTAAGGAGAATGTGACAGCTAATGAAAGACAAGAACAAGCTGCCTTCATAGAAGAGATTAGTAGAACTGCGCCTATCAAGTACCTTTACAAGTATCTATCTTGCAACAGAATTTTCACAGAGAATTACGAGGAATTCAGGGGTATGTTGACAGACCTCTGGTTCACTCTTTATGGTCGTGGTGGTTCCTCTGGCTCATCTTCTTCTTTTGAGCATGTTTTTGTTGGCGAAATCAAGAGTCGCGGGGAACAAGAAGTGTCAGGCTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCAAAGGGTAATGCTGACTATCAAGGTTACATCTTGCCTCGCAGACGTGGGGAATTTCCGGACTCTGAATCACAGTTGCTCACTGTTCAGTTTGAGTGGCATGGAGTCCTGAAAAATATCTCAAGCATGTTCATGGGAGTAAGCCCTGAGTTTGAATTAGCCCTCTATACACTGTGTTTCTTTGCAGGCGGGGACGACAACCACATTGAAGTTGGTCCATATCCAGTTAATATCAAGTGCTATCATCTGGGAAACAAAATTGGTTCTGCCTTCCCAATGGCAGAATGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33743.p2 GENE.S_Transcript_33743~~S_Transcript_33743.p2 ORF type:complete len:431 (+),score=94.27,XendoU|PF09412.6|5.9e-95 S_Transcript_33743:2078-3370(+)
MEGLIKGLVDVAIGHDGRDDDDNNNNNNNNQFHRNSESLEERSRSTWAEVVSGDQDNDDPDRNRYDDDRRRNRPNRMGYGDGDADADQYSEFSESRPSSRPHHQEVGEATDGWQTAGKKHHKQPQKIHMDHWNSYKRPPSEQEYSEEVSQVAELEPSEAELADYKSACAKLWELDFNRLVPGKDYEINVGEGKRVHDRGDMADENLFTWVSEDVLRRPTFSRFCALLDNYNPNQGCKENVTANERQEQAAFIEEISRTAPIKYLYKYLSCNRIFTENYEEFRGMLTDLWFTLYGRGGSSGSSSSFEHVFVGEIKSRGEQEVSGFHNWLQFYLEEAKGNADYQGYILPRRRGEFPDSESQLLTVQFEWHGVLKNISSMFMGVSPEFELALYTLCFFAGGDDNHIEVGPYPVNIKCYHLGNKIGSAFPMAEC*

Click here to download the sequence:
Link to NCBI Protein BLAST