Transcript Information: S_Transcript_337488.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeOrtholog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value3.7E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9404020614242
Replicate 27.288600121679
Replicate 33.4580130156751
Condition 2: 8 Hour
Replicate 12.2848632482643
Replicate 20.99874324284494
Replicate 31.1419204074097
Condition 3: 24 Hour
Replicate 10.39008720518918
Replicate 21.0117773025155
Replicate 30.22519682504568


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_337488.p1 GENE.S_Transcript_337488~~S_Transcript_337488.p1 ORF type:5prime_partial len:112 (+),score=17.52,XET_C|PF06955.8|6e+03,XET_C|PF06955.8|2.4e-20,Glyco_hydro_16|PF00722.17|1.3e-06 S_Transcript_337488:3-338(+)
AAGAGCCAGCCAATGAGGATATATTCGAGTCTATGGAACGCCGATGACTGGGCAACACAAGGAGGAAGAGTAAAGACAGACTGGTCTAAAGCTCCATTTACAGCTTCATACAGGAACTTCATTGCCGATGCTTGTGTTGTTTCCAATGGTAAATCCTCTTGCAGCTCGAATTCTCGGTCCAGCAGGAACAATGCTTGGTTGACACAAGAGCTAGACACAGGCAGCCAAGCCAGGATGAAGTTGATTCAGAGGAACTACATGATCTACAATTACTGCACTGATGCTAAGAGATTCCCTCAAGGATTTCCTAAGGAGTGCACTGCCACAAGTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_337488.p1 GENE.S_Transcript_337488~~S_Transcript_337488.p1 ORF type:5prime_partial len:112 (+),score=17.52,XET_C|PF06955.8|6e+03,XET_C|PF06955.8|2.4e-20,Glyco_hydro_16|PF00722.17|1.3e-06 S_Transcript_337488:3-338(+)
KSQPMRIYSSLWNADDWATQGGRVKTDWSKAPFTASYRNFIADACVVSNGKSSCSSNSRSSRNNAWLTQELDTGSQARMKLIQRNYMIYNYCTDAKRFPQGFPKECTATSS*

Click here to download the sequence:
Link to NCBI Protein BLAST