Transcript Information: S_Transcript_337944.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeHomolog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value1E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1188.69750343881
Replicate 2233.18490878075
Replicate 3259.08120211058
Condition 2: 8 Hour
Replicate 1169.92252497375
Replicate 2174.21482132213
Replicate 3179.25720778444
Condition 3: 24 Hour
Replicate 1246.45211640186
Replicate 2196.74117283297
Replicate 3242.15845825125


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_337944.p1 GENE.S_Transcript_337944~~S_Transcript_337944.p1 ORF type:internal len:188 (-),score=63.35 S_Transcript_337944:1-561(-)
AGGGCAAGCATGAATCAGAGACAAAGGGGGCCACTTGAATCCTTGATGTTAAGGAATGCAAGTGACACTGTTGCAATAACCTCATTTGGGAAGGCAGAAGATGGATCAACTGACATCCCAGACCTCCCACAGATCAGGACAGGAGTTCCTTCTAGCGATGCACTGAATTCTGTGGCAGCATCATTCCAGGTAATGTCGAGATCAGTTGAAGGAGCCATAGATGAGAAATATCCTGCATACAAAGACCGACATAAGTTAGCATTAGAGAGGGAAAAGCAGATTAAGGAAAAAGCAGAAAAGGCACGAGCTGAGAAGTTTGGTGACAAGTCAGGATTGAACCCAGATATTAAGATAAGAGATAAAGCTGCCTTGCCACCAAAGCTTGCTAAGATAAAGGAGAAGGCTAACATTGCTAGCGAGTCTGGTCCCCAATCTGCTGATAATAAGGAAGCTGAATCTCCTGCAGTGAGCAAAATGAAACTTGAACAGATTGAGAAAAGGCCTCCTAGGGTTCCAAGGCCGCCACCCAAAGCATCTGGAGGGAATGCTGCTGGTGGAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_337944.p1 GENE.S_Transcript_337944~~S_Transcript_337944.p1 ORF type:internal len:188 (-),score=63.35 S_Transcript_337944:1-561(-)
RASMNQRQRGPLESLMLRNASDTVAITSFGKAEDGSTDIPDLPQIRTGVPSSDALNSVAASFQVMSRSVEGAIDEKYPAYKDRHKLALEREKQIKEKAEKARAEKFGDKSGLNPDIKIRDKAALPPKLAKIKEKANIASESGPQSADNKEAESPAVSKMKLEQIEKRPPRVPRPPPKASGGNAAGGN

Click here to download the sequence:
Link to NCBI Protein BLAST