Transcript Information: S_Transcript_337945.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeOrtholog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value4.5E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5126931130017
Replicate 25.3581060353964
Replicate 36.8501591167659
Condition 2: 8 Hour
Replicate 15.1790233627323
Replicate 210.067331887877
Replicate 34.7199376839602
Condition 3: 24 Hour
Replicate 18.7379533962377
Replicate 27.7704496833191
Replicate 38.8277155417906


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_337945.p1 GENE.S_Transcript_337945~~S_Transcript_337945.p1 ORF type:5prime_partial len:140 (-),score=37.86 S_Transcript_337945:12-431(-)
CCACCACCACCTCCTCGTGCTCCTGGTGCACCACCTCCTCCACCTCCACTACCAGGTGGCCTGCCAAGGGGGGCAGGAGGCAGTGACAAAGTTCATCGAGCTCCAGAAGTTGTTGAATTTTATCAGAGCCTAATGAAACGCGAGGCAAAGAAAGAGACGCCAGCTTTGATGTCATCAACTTCTAGTACAGCTGATGCTAGGAGCAACATGATTGGCGAGATTGAGAATAGATCCTCCTTCCTCTTAGCAGTGAAAGCTGACGTGGAAACTCAAGGTGATTTTGTTCAGTCATTAGCAACTGAAGTCCGAACAGCTACTTTTGCCGACATAGAAGATCTGGTTGCTTTTGTGAACTGGCTAGACGAAGAACTTTCCTTCTTGGTATGCATCTATTTTTTTTCCCCTAATTTGTATGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_337945.p1 GENE.S_Transcript_337945~~S_Transcript_337945.p1 ORF type:5prime_partial len:140 (-),score=37.86 S_Transcript_337945:12-431(-)
PPPPPRAPGAPPPPPPLPGGLPRGAGGSDKVHRAPEVVEFYQSLMKREAKKETPALMSSTSSTADARSNMIGEIENRSSFLLAVKADVETQGDFVQSLATEVRTATFADIEDLVAFVNWLDEELSFLVCIYFFSPNLYA*

Click here to download the sequence:
Link to NCBI Protein BLAST