Transcript Information: S_Transcript_338050.p1


Annotated TAIR IDAT5G48910.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)LPA66
Annotation TypeHomolog
Chromosome Positionchr5:19832969-19834909 | Reverse length=646
E-Value1E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60484093716319
Replicate 21.0028540707961
Replicate 30.69858848801517
Condition 2: 8 Hour
Replicate 11.7771158597611
Replicate 21.1863859127128
Replicate 30.80741846988566
Condition 3: 24 Hour
Replicate 11.4894238743587
Replicate 21.2018687957154
Replicate 32.2929131277378


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_338050.p1 GENE.S_Transcript_338050~~S_Transcript_338050.p1 ORF type:internal len:132 (-),score=35.23,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|4.7e+02,PPR_2|PF13041.2|0.029,PPR|PF01535.16|6.8e+02,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|13,PPR|PF01535.16|0.022 S_Transcript_338050:1-393(-)
GATGACCCATTTGAAGCTTTAGCTATTTTCGTATTTATGTTGTGTGATGAGTTAGTTTCTCCTAACAAGTTCACTTACCCTTCTGTGCTTAAAGCTTGTGCAAAGTTGAAAACTTTGGATGTGGGCAAGCAAGTTCATGCCCAAGTGGTAAAATTTGCATTTTTTGATGATGAGTTTGTGGTTAGTAATCTAGTTAGGATGTACCTTATGTGTGGTAATATGGGTGATGCTCATTTGTTGTTTTATAAGAGGATTGAACATGGTGATGATGGATGTATGGGAAATGGAGTTATGGGTGTTGATGGGCTTAGGAAAAGGAGACAAGACGGTGATGTGGTATTGTGGAATGTTATGGTTGATGGGTACTTGAAACTTGGAGACCTGAAAGCTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_338050.p1 GENE.S_Transcript_338050~~S_Transcript_338050.p1 ORF type:internal len:132 (-),score=35.23,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|4.7e+02,PPR_2|PF13041.2|0.029,PPR|PF01535.16|6.8e+02,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|13,PPR|PF01535.16|0.022 S_Transcript_338050:1-393(-)
DDPFEALAIFVFMLCDELVSPNKFTYPSVLKACAKLKTLDVGKQVHAQVVKFAFFDDEFVVSNLVRMYLMCGNMGDAHLLFYKRIEHGDDGCMGNGVMGVDGLRKRRQDGDVVLWNVMVDGYLKLGDLKAA

Click here to download the sequence:
Link to NCBI Protein BLAST