Transcript Information: S_Transcript_338051.p1


Annotated TAIR IDAT5G48910.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)LPA66
Annotation TypeHomolog
Chromosome Positionchr5:19832969-19834909 | Reverse length=646
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.7696321938668
Replicate 30.64335125873025
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.49571738616236
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_338051.p1 GENE.S_Transcript_338051~~S_Transcript_338051.p1 ORF type:internal len:86 (+),score=19.60,PPR|PF01535.16|0.34,PPR|PF01535.16|0.0022 S_Transcript_338051:1-255(+)
CTCATTTGTTGTTTTATAAGAGGATTGAACATGGTGATGATGGATGTATGGGAAATGGAGTTATGGGTGTTGATGGGCTTAGGAAAAGGAGACAAGAAGGTGTTGTGGTTTTGTGGAATGTTATGGTTGATACTTGAACTTGGAGACCTGAAAGCTGCACGTGAATTGTTTGATAAAATGCCTCAAAGAAGTGTTGTTTCTTGGAATGGAATGATAGCTGGTTATGCCCAGCTTGGATGTTTTAAGGATGCAGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_338051.p1 GENE.S_Transcript_338051~~S_Transcript_338051.p1 ORF type:internal len:86 (+),score=19.60,PPR|PF01535.16|0.34,PPR|PF01535.16|0.0022 S_Transcript_338051:1-255(+)
LICCFIRGLNMVMMDVWEMELWVLMGLGKGDKKVLWFCGMLWLILELGDLKAARELFDKMPQRSVVSWNGMIAGYAQLGCFKDAD

Click here to download the sequence:
Link to NCBI Protein BLAST