Transcript Information: S_Transcript_338057.p1


Annotated TAIR IDAT2G13980.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:5869853-5870368 | Reverse length=171
E-Value4.1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2491816906309
Replicate 20.72041761820456
Replicate 31.2420618178751
Condition 2: 8 Hour
Replicate 10.82690288984801
Replicate 20.77616617729664
Replicate 30.8265328663156
Condition 3: 24 Hour
Replicate 10.80246510781775
Replicate 20.97130621041489
Replicate 31.1838918802401


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_338057.p1 GENE.S_Transcript_338057~~S_Transcript_338057.p1 ORF type:complete len:490 (+),score=55.59,RVT_3|PF13456.2|1.5e-22,zf-RVT|PF13966.2|7.1e-15 S_Transcript_338057:176-1645(+)
ATGAGGAATCCGGATTCTCTGATGGCGCGAGTGCTCAAGGCGAGGTATTTTCCCAAAAGCGATATCTTGCAGGCAAACATGGGTTATCGTCCAAGTTATGTATGGAGGAGTTTAATGAGTGCAAAGTGGGTGATAGAGAAAGGGTGTCGGTGGGTGGTGGGAAATGGAAAGGATATTGGGGTCTGGAAGGATAAGTGGATGTCTCGACCTGGGAGTTTCAAAGTGCTCTCCCCACCTAAAAGGGGTCACGAGAACATGCTAGTGGCAGACCTTATCATGGAGGGGGAAGGCCAGTGGAATGAAGAGAGGGTAAGGAGTATATTTTTGCCTTTTGAAGCCGAGGAGATACTGAATATCCCCTTGAGTAGGCATGGGCAACAGGATGTTTTGTCGTGGGCATTCACAAAGGATGGTTTCTACTCGGTGCGATCGGGCTATCACTTTGTACGTTGGGATCTTGGTCGCCGAGAGGAGGCTACAACTTCAGAGGTTACGAAAGAGCCATGGAAGACCCTTTGGACCCTGGACGTCCCCCCGAAGGTTCGAAATTTTGGGTGGAGATTGGTTAGTAGAGCGCTCCCCTGTAGAGAAAATCTGAGTAGGCGCCTTCAAAGTGTGGATCCTACCTGTTTTCGTTGCGGACGAGGAGCGGAAACGGAGCTGCACGCTGTATGTTTTTGCCCAACTGTGATTGGCATGTGGGAGGATGCAGGCCTAGCAGAAGTGGTGGAGGAGGACCGTTCCGTCTTGGTAGCAGAGTGGCTTGATGGGTGGCGCAGGAGAAGCTCAAGACACGTATTTGAGAAGATAATTATGCTAGCTTGGGCTGCATGGGGGTGGAGAAATGAGTCCCTTTTTAACGCTAAAGTGCGTAACTCCCAGGAGGTTACTAATAGTGCTATGCAATACTTATTAGCATACAAAGGGGCAAACGTTAAAGACATGAAAAGCTCAACTAGGACCACGACATGCTGGACTGCACCTAGAGAAGATTTTGTCAAAATAAATGTAGATGCTGGAGTGTTGGGAAAAGAGGGGACAGGTATGGGTATAATAATCCGAGATAGCCAAGGCGGTGTGATGTGTGCTGCTGTGAGACAAATAAAAGCAACCTGGAGACCAGATGAAGCTGAGGCAATGGCAATCTTGGTTGGTCTTAAACAAGGTATTCAATGTGGGCAGCGGAAAGTAATACTGGAAGGGGATTGTCTGACAATTATTAACTTGCTCAAGAAGAAGATAAAGCCGAATAACACTCTTGGTCATATTCTTGAGGACATATTTATAATTGCTAATTCGTTTGAAGTTATCGAGTGGAGTCATGTAAAAAGAGAAGGTAATAAGGTAGCACATGAAATGGCTCACCTTGCTCCTTTCTCCTTCTCTACGAGAGTTTGGATAGATTGTTTTCCTATTGCCATACATGATTCATTGGCAAATGATTTTTGTAACTCTCATTTACACCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_338057.p1 GENE.S_Transcript_338057~~S_Transcript_338057.p1 ORF type:complete len:490 (+),score=55.59,RVT_3|PF13456.2|1.5e-22,zf-RVT|PF13966.2|7.1e-15 S_Transcript_338057:176-1645(+)
MRNPDSLMARVLKARYFPKSDILQANMGYRPSYVWRSLMSAKWVIEKGCRWVVGNGKDIGVWKDKWMSRPGSFKVLSPPKRGHENMLVADLIMEGEGQWNEERVRSIFLPFEAEEILNIPLSRHGQQDVLSWAFTKDGFYSVRSGYHFVRWDLGRREEATTSEVTKEPWKTLWTLDVPPKVRNFGWRLVSRALPCRENLSRRLQSVDPTCFRCGRGAETELHAVCFCPTVIGMWEDAGLAEVVEEDRSVLVAEWLDGWRRRSSRHVFEKIIMLAWAAWGWRNESLFNAKVRNSQEVTNSAMQYLLAYKGANVKDMKSSTRTTTCWTAPREDFVKINVDAGVLGKEGTGMGIIIRDSQGGVMCAAVRQIKATWRPDEAEAMAILVGLKQGIQCGQRKVILEGDCLTIINLLKKKIKPNNTLGHILEDIFIIANSFEVIEWSHVKREGNKVAHEMAHLAPFSFSTRVWIDCFPIAIHDSLANDFCNSHLHH*

Click here to download the sequence:
Link to NCBI Protein BLAST