Transcript Information: S_Transcript_338202.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value1E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.028161906068974
Replicate 20.046693734513259
Replicate 30.019516122839789
Condition 2: 8 Hour
Replicate 10.022566550600141
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.02398286939296
Replicate 30.080069982238464


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_338202.p1 GENE.S_Transcript_338202~~S_Transcript_338202.p1 ORF type:3prime_partial len:945 (-),score=187.39,RVT_1|PF00078.23|2.3e-27,gag-asp_proteas|PF13975.2|1.5e-08,RVP_2|PF08284.7|5e-07,RVP_2|PF08284.7|9.5e+03,Asp_protease_2|PF13650.2|1.6e-05 S_Transcript_338202:3-2834(-)
ATGCAGGTGCGCATGTTTGATCCAAAATCCCTTCAGCAAGCTTTTTGCTTAGCCAAATTACAAGAAGCTACCACCAAAGCTAAAAAAGCCAAAAAACCTTACAAACCACCTTATTCAACTCAACCCCCTTCCACCTTACCCTTGAAGAAAACACCCTTACCACCTCTTTTACCTACCCCAAACACTAAACCACCCCCAGCAAACCCCAAACCTCAAACCTACCCTTTTAGACCCAAAATTCCACCTCAAAGGATCAGATTATCACCTGCTGAATTAGCTGACAGGAGATCCAAGGGTCTCTGTTACTTTTGTGATGATAAATTTGAAGTTGGGCATGTCTGCAAGGGGAAAAGACCTCAGGTTTACCACATTGAGGTAGAGATGGAAGATGTGCAGTGCGGGATGGGTGAGGAATCTGTGGAGGAGGCTACTCTTCAATATATGTCTGTGTTGGCCACTGTGAGTACACCTCCTATGTATCACACATTCAAGTTGAAGGCTCAATATGGCAGGAGAACATTGTTGCTGCTGTTGGACAGTGGTAGCACGCACAATTTCCTGGATGCTACACTGGCTCAAAAATTGGGTTGTGCTATTCAATCCTCATCACCAATGCAAGTGAGGGTTGCAGATGGAGGACACATGCCATGTAACAGTTGGGTGAAGGATTTTACTTGGTCTATGCAGGGTCATCAGTTCAAGGCTGATGTTAACTTACTTCCCTTGGCTGGCTGTGATATGATATTGGGAGTACAGTGGCTCCATTCTTTGGGACCAGTCCTTTGGAATTTTACTGACCTTACCATGGAGATTTTGCATCAGAATCAATCTATACTTCTGAGAGGGGTAAAAGGACAAAGATGGAGCAAGATTGAACCACAAACCTTATCAAGGCTATTGCAAGAAGGTGTGCAAGCTCAAAAAATGGAACTATATCCAGCCTCATTACTCAACCAGATTCTCATAGGGGAGTGTTATCAACTTCAGGTGGAGGAACAAAACCAAGAGAAGTTACCACCAAATTTGCTTGAGGTACTCAATTTATTTCCCAATATCTTTAAGGAACCAACATCCTTACCTCCCTCCAGACCTGGAATAGATCATCAAATTCCCCTGAAGGAGGGTACAAATCCAATCAATATAAGGCCCTACAGGTACCCTTTGCTCCAGAAAGATGTTATTGAGAAGCTTACCAAGGAACTCTTGGACCAGGGGATTATAAAGGACAGCAACAGCCCTTTTGCCTCCCCTGTAGTGTTGGTTAAAAAGAAGGATGGAGGGTGGAGATTGTGTGTGGACTACAGGGAGCTGAACAAAGCTACTGTGAAGGACAAATTCCCTATACCAGTGGTTGAAGAGTTACTAGATGAACTGCATGGTACTAAGTTTTTCACAAAGTTGGATTTAAGGTCTGGATATTATCAGATCAGAATGGCTGAGCAAGATGTCTTCAAGACTGCTTTTAGAACACATTGTGGACATTATGAGTTCTTAGTCATGCCCTTTGGCCTTACAAATGCTCCCTCTACTTTTCAGGCTCTTATGAATCAGGTTTTCCAACCATATTTGAGGAAATTTGTCCTGGTATTCTTTGATGACATTCTGATCTATAGCAAATGTTGGGCTGATCATTTATACCACCTAAGATTAGTCCTCCTTGCTCTTCAACAAAATACTCTATATGTCAAAGCTAGTAAATGCTCATTTGGGGTGCAAAGGATTGAGTACTTGGGGCATATCATTTCTGATGAAGGGGTGTCAACAGACCCTTCTAAAATTCAGGCTATTTTGGATTGGCCACCACCCACTAACTTGAAACAGTTAAGGGGCTTCTTGGGCCTCACAGGGTACTACAGGAGGTTTGTAAAGGACTATGGCAAGATTGCAAGGGCCCTCACTGATCTTCTTAAAAAGGAAGCTTTCACTTGGACCACATCTGCTCAGGACTCTTTCCAAGCTCTTAAGACAGCCATGACAACTCCACCAGTCCTTGCACTTCCTGATTTCAAGTCCACTTTTGTTATTGAATCTGATGCTTCTGGGAATGGCATAGGGGCAGTATTAATGCAGAATGGCCACCCCATTGCCTTCATTAGTAAGGCTCTATCTCCAAAAAACCTTATGCTGTCCACTTATGAAAGAGAGTTATTGGCCATTATATTTGCTATTCAAAAGTGGAGCCCCTACTTGATGGACAGACATTTTATCATCAAAATTGATCAGCAAAGCCTCAAATATCTGTTAGAAAACAAAATTTCCACTCCCTTCCACCAAAAATGGCTCTCTAAATTACTTGGCTTTGACTATGAAATTTGCTACAAGCAAGGGAGCTCTAACAAGGTGGCTGATGCACTTTCTAGGGTGCAAGGAGGGGAGCTTCTGCAATTACTGGTATCCACCATCCATACTGAACTACTGGAGGATATTAAAAAGAGTTACACTCATGACCTTCAATTGCAAGAATTGATTGAAAGCAAGGGACAGGATGTTGGGTCCCATCCAAAATTTTCATGGTCCCAGGGCATTATCAGGAGGGCTGGTAAGTTGGTGGTTGGCAATGTTCCTGAACTGAGACATCAAATTATCAAATGGTATCATACCTCAGCTCAAGGGGGTCACTCTGGGTATTTAGTAACTTATCAGGGCATTAAAGGGGCTTTTTACTGGAAAGGCATGAAGAAGCAGGTCCAAGAATTTGTCAAGGCGTGTTCTATTTGCCAAAAATGTAAAAGTGAGCATGTGGCTTACCTTGGGTTGTTACAGCCCCTTCCCATTCCTCAAGGAGTATGGGAGGATGTAGCTATGGATTTTATTGAGGGCCTTCCTGAGTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_338202.p1 GENE.S_Transcript_338202~~S_Transcript_338202.p1 ORF type:3prime_partial len:945 (-),score=187.39,RVT_1|PF00078.23|2.3e-27,gag-asp_proteas|PF13975.2|1.5e-08,RVP_2|PF08284.7|5e-07,RVP_2|PF08284.7|9.5e+03,Asp_protease_2|PF13650.2|1.6e-05 S_Transcript_338202:3-2834(-)
MQVRMFDPKSLQQAFCLAKLQEATTKAKKAKKPYKPPYSTQPPSTLPLKKTPLPPLLPTPNTKPPPANPKPQTYPFRPKIPPQRIRLSPAELADRRSKGLCYFCDDKFEVGHVCKGKRPQVYHIEVEMEDVQCGMGEESVEEATLQYMSVLATVSTPPMYHTFKLKAQYGRRTLLLLLDSGSTHNFLDATLAQKLGCAIQSSSPMQVRVADGGHMPCNSWVKDFTWSMQGHQFKADVNLLPLAGCDMILGVQWLHSLGPVLWNFTDLTMEILHQNQSILLRGVKGQRWSKIEPQTLSRLLQEGVQAQKMELYPASLLNQILIGECYQLQVEEQNQEKLPPNLLEVLNLFPNIFKEPTSLPPSRPGIDHQIPLKEGTNPINIRPYRYPLLQKDVIEKLTKELLDQGIIKDSNSPFASPVVLVKKKDGGWRLCVDYRELNKATVKDKFPIPVVEELLDELHGTKFFTKLDLRSGYYQIRMAEQDVFKTAFRTHCGHYEFLVMPFGLTNAPSTFQALMNQVFQPYLRKFVLVFFDDILIYSKCWADHLYHLRLVLLALQQNTLYVKASKCSFGVQRIEYLGHIISDEGVSTDPSKIQAILDWPPPTNLKQLRGFLGLTGYYRRFVKDYGKIARALTDLLKKEAFTWTTSAQDSFQALKTAMTTPPVLALPDFKSTFVIESDASGNGIGAVLMQNGHPIAFISKALSPKNLMLSTYERELLAIIFAIQKWSPYLMDRHFIIKIDQQSLKYLLENKISTPFHQKWLSKLLGFDYEICYKQGSSNKVADALSRVQGGELLQLLVSTIHTELLEDIKKSYTHDLQLQELIESKGQDVGSHPKFSWSQGIIRRAGKLVVGNVPELRHQIIKWYHTSAQGGHSGYLVTYQGIKGAFYWKGMKKQVQEFVKACSICQKCKSEHVAYLGLLQPLPIPQGVWEDVAMDFIEGLPES

Click here to download the sequence:
Link to NCBI Protein BLAST