Transcript Information: S_Transcript_338209.p1


Annotated TAIR IDAT5G38030.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15171486-15175302 | Reverse length=498
E-Value5.1E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2404364982499
Replicate 20.46743198215074
Replicate 30.39073593397459
Condition 2: 8 Hour
Replicate 10.27108547013305
Replicate 20.61617379728061
Replicate 31.4903029045856
Condition 3: 24 Hour
Replicate 10.69422299228583
Replicate 21.1043806488474
Replicate 30.42749227805281


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_338209.p1 GENE.S_Transcript_338209~~S_Transcript_338209.p1 ORF type:complete len:472 (+),score=56.67,MatE|PF01554.14|1.2e-30,MatE|PF01554.14|3.5e-27 S_Transcript_338209:57-1472(+)
ATGAAACAGCTGACTAAGGAATTCTTGGTTGAGTCTAGGAAAATATGGTACCTAGCTGGTCCGGCATTTTTCACTTCCATTTGCCAGTTCTCTCTCGGCGCAGTCACTCAAGTCTTTGCCGGACAACTAGGCACTCTCGAGCTCGCTACTTTCTCCATTGAGAACACCATCATTGCTGGCTTATCCTTTGGCATCATGCTAGGAATGGGAAGCGCCTTAGAGACACTATGTGGACAAGCATTTGGAGCAGGAAAAGAAGGCATGCTAGGAATCTACATGCAGAGATCATGGGTGATCCTCAATACAACTGGTGTAATCCTGACCTTTCTATATATATTTGCTGCTCCAATTCTAAAGCTAATAGGCCAGAATTCAGAAATCTCAGAAGCTGCAGGGAGGTTTTCAGTCCTCATGATCCCCCAGTTGTTCGCTTACGCGATGAATTTCCCCATTGTCAAGTTCTTGCAGGCGCAGAGCAAGGTCATCGTGATGGCAGCTATAGCAGCAATTGTGTTGATGCTACACACATTGTTTAGTTGGTTGGTTATGATCAAGTTGCATTGGGGTATGGTGGGAGCCGCAGTGGTGCTAAATGGCTCATGGTGGTTCATAGTGGTGGCTCAGCTTGTTTATATCTTCAATGGTGGGTGTAAGGAGGCTTGGACTGGGTTCTCTTCTAAGGCATTTGCTGATCTTTGGGGTTTTGTGAGGCTGTCCCTTGTTTCTGCTGTAATGCTCTGCTTAGAAGTGTGGTATTACGTGGCCCTGCTTCTGTTTGCTGGGTACTTGAAGAATGCAAAAGTGTCAGTAGATGCCTTGTCCATATGCATAAATCTACTAGGTTGGACAATTATGCTAGCAATCGGATTTAACGCAGCTATAAGCGTGAGGGTGTCAAATGAATTAGGTGCAGCACATCCTCAAGCAGCAAAGTTCTCTCTCGTGGTGGCTGTTATGAATTCATTCATGGTTGGTTTGCTCATCTCAATTGTTCTCCTAATCGTTCGAAGCCACTACCCAAAATTATTTACCAACAGCAAAGAAGTGCAACAACTTGTGTACATACTCACCCCTTTGCTTGCAATAACCATTGCAATTAGCAATGTTCAGCCTGTTCTTTCTGGTGTCGCGATAGGAGCAGGCTGGCAAGGGTTGGTGGCCTATGTGAACATCGGGTGCTACTATTTGTTTGGAATTCCTTTAGGCCTCATATTGGGTTACAAGCTCCACTTGGGTGTTAGAGGATTTTGGTATGGTTTAATGGCAGGAACATCAGCACAAACACTAGTCCTATTCATGATGATATACAGAACGAACTGGAATAAAGAGGCCAGCGTTGCTGGAGATAGACTAAAACAGTGGGGAGGAACTGAAGATGCTAATCATGTCATAGACAGCAATATGGAGAGATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_338209.p1 GENE.S_Transcript_338209~~S_Transcript_338209.p1 ORF type:complete len:472 (+),score=56.67,MatE|PF01554.14|1.2e-30,MatE|PF01554.14|3.5e-27 S_Transcript_338209:57-1472(+)
MKQLTKEFLVESRKIWYLAGPAFFTSICQFSLGAVTQVFAGQLGTLELATFSIENTIIAGLSFGIMLGMGSALETLCGQAFGAGKEGMLGIYMQRSWVILNTTGVILTFLYIFAAPILKLIGQNSEISEAAGRFSVLMIPQLFAYAMNFPIVKFLQAQSKVIVMAAIAAIVLMLHTLFSWLVMIKLHWGMVGAAVVLNGSWWFIVVAQLVYIFNGGCKEAWTGFSSKAFADLWGFVRLSLVSAVMLCLEVWYYVALLLFAGYLKNAKVSVDALSICINLLGWTIMLAIGFNAAISVRVSNELGAAHPQAAKFSLVVAVMNSFMVGLLISIVLLIVRSHYPKLFTNSKEVQQLVYILTPLLAITIAISNVQPVLSGVAIGAGWQGLVAYVNIGCYYLFGIPLGLILGYKLHLGVRGFWYGLMAGTSAQTLVLFMMIYRTNWNKEASVAGDRLKQWGGTEDANHVIDSNMERS*

Click here to download the sequence:
Link to NCBI Protein BLAST