Transcript Information: S_Transcript_338390.p1


Annotated TAIR IDAT2G32240.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13684614-13689330 | Reverse length=1333
E-Value7E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3698280784806
Replicate 25.3008000884938
Replicate 32.3352815170793
Condition 2: 8 Hour
Replicate 11.8694335667617
Replicate 22.324347910621
Replicate 32.699084599332
Condition 3: 24 Hour
Replicate 12.9079228023194
Replicate 22.13393031076
Replicate 33.5212594461688


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_338390.p1 GENE.S_Transcript_338390~~S_Transcript_338390.p1 ORF type:internal len:308 (-),score=114.06,AAA_13|PF13166.2|5.1e-06,ATG16|PF08614.7|0.073,ATG16|PF08614.7|0.01,IncA|PF04156.10|0.0019,IncA|PF04156.10|4.1,IncA|PF04156.10|0.13,Fib_alpha|PF08702.6|60,Fib_alpha|PF08702.6|8.8e-06 S_Transcript_338390:2-922(-)
AAGAAAGAGGAGAAAGAAAACTCTTTCGAAGATGGAGAATTCATTAAGGTCGACAGGGAAACGTTAGATGTGAAGGAAAATGGAAAGAAAGAGGAGAAAGAAAACGCTTTCGATGATGGAGAATTCATTAAGGTCGACAGGGAAACGTTAGATGTGAAGGAAAACCCGCGTAGTGTTGAAGTTGCATCTGTAGAGGAGAGCAAGCCACCTGTGAGTGAATCTAGCAGGGAGTTAATTGAAGCACAGGAGAAGATTAGTGAACTTGAGACTGAATTGAAAAGAGTGGCAACAGCATTAAAGGATTCTGAATCCCAGAATGTGAAGCTGAAAGACGAGGTTTTATTGACAGAAGAAAAGCTTGAAGGAAGTGGAAAGAAGTATGCGGAGCTTGAGCAAGATCACAAGAAATTGCAGGAACAGATGGTAGATGCCGAGAGCAACTTCAAGGAAAATCTGAAGACGATGGAGGAGGCATTGGAAGATCATGCTTCAAAGCACAAGGAACTTGCTGGCATTAAGGAAACGTTTGACAGTCTTAATCTGGAGTCCGAGTGCTCAAAGAAGAAGGTACAGGAGTTGGAGCAAGAGTTGCAATCTCGTACAGCTGAATTGGAGGATCTGATGAAGTCCTCTCTTTCCAAAATTGAGGACGCTGAGAAAAAGGTCACTGATCTGGAATCATTATTGGAAGAAAAGAAGCAGAAAGTGGGAGAACTTGAAGAGCAAATAAACTCGCTGGAGTCTAAATGTGCGGATGCACAAGCAGAATCAAAGAAGCATTTAGGCATGGTGTCTGAACTCAGTGCAGAAATTGAGAAGTTCAGGTCATCGATGTTAGCCTTTGAGAGTGCCCTGCAGACAGCAAGTGAGAAAGAAATTGCATTGATGGAGTCTTTAGATGCAGTGAAGGAGGAGAAAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_338390.p1 GENE.S_Transcript_338390~~S_Transcript_338390.p1 ORF type:internal len:308 (-),score=114.06,AAA_13|PF13166.2|5.1e-06,ATG16|PF08614.7|0.073,ATG16|PF08614.7|0.01,IncA|PF04156.10|0.0019,IncA|PF04156.10|4.1,IncA|PF04156.10|0.13,Fib_alpha|PF08702.6|60,Fib_alpha|PF08702.6|8.8e-06 S_Transcript_338390:2-922(-)
KKEEKENSFEDGEFIKVDRETLDVKENGKKEEKENAFDDGEFIKVDRETLDVKENPRSVEVASVEESKPPVSESSRELIEAQEKISELETELKRVATALKDSESQNVKLKDEVLLTEEKLEGSGKKYAELEQDHKKLQEQMVDAESNFKENLKTMEEALEDHASKHKELAGIKETFDSLNLESECSKKKVQELEQELQSRTAELEDLMKSSLSKIEDAEKKVTDLESLLEEKKQKVGELEEQINSLESKCADAQAESKKHLGMVSELSAEIEKFRSSMLAFESALQTASEKEIALMESLDAVKEEKR

Click here to download the sequence:
Link to NCBI Protein BLAST