Transcript Information: S_Transcript_338391.p1


Annotated TAIR IDAT2G32240.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13684614-13689330 | Reverse length=1333
E-Value5E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2638586420504
Replicate 22.2895347654025
Replicate 32.261844991385
Condition 2: 8 Hour
Replicate 12.0118292752012
Replicate 21.7939689946951
Replicate 33.0163935290068
Condition 3: 24 Hour
Replicate 12.6790894846955
Replicate 23.9554765487021
Replicate 33.3312134119965


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_338391.p1 GENE.S_Transcript_338391~~S_Transcript_338391.p1 ORF type:3prime_partial len:212 (+),score=80.78,ATG16|PF08614.7|0.00049,ATG16|PF08614.7|0.016 S_Transcript_338391:3-635(+)
ATGGAAGAGGCATTGGAACATCATGCTTCAAAGCACAAGGAACTTGCTGGCATTAAGGAAACGTTTGACAGTCTTAATCTGGAGTCCGAGAGCTCAAAGAAGAAGATACTGGGGTTGGAGCAAGAGTTGCAATCTCGTGCAGCTGAATTGGAGGATCTGATGAAGTCCTCTCTTTCCAAAATTGAGGACGCTGAGAAAAAGGTCACTGATCTGGAATCATTATTGGAAGAAAAGAAGCAGAAAGTGGGAGAACTTGAAGATCAAATAAACTCGCTGGAGTCTAAATGTGCAGATGCACAAGCAGAATCGAAGAAGCATTCGGGCATGGTGTCTGAACTCAGTGCAGAAATTGAGAAGTTCAGGTCATCGATGTTAGCCTTTGAGAGTGCCCTGCAGACAGCAAGTGAGAAAGAAATTGCTTTGATGGAGTCTTTAGATGCAGTGAAGGCGGAGAAAAGAGTTGCAGAAGAAGCGTTGGAGAGTTCCGCCAAGAAGTTGAAGGAAGCTGAAAATCTACTCGAAGCATTGCACGGTGAATTGTCTGTTACACAAGGAAAATTGGAGGGCATTGAAAATGATCTGAAGGCTTCTGGATTAAGAGAAACTGAGATTATAGAGAAGCTGAAATCTGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_338391.p1 GENE.S_Transcript_338391~~S_Transcript_338391.p1 ORF type:3prime_partial len:212 (+),score=80.78,ATG16|PF08614.7|0.00049,ATG16|PF08614.7|0.016 S_Transcript_338391:3-635(+)
MEEALEHHASKHKELAGIKETFDSLNLESESSKKKILGLEQELQSRAAELEDLMKSSLSKIEDAEKKVTDLESLLEEKKQKVGELEDQINSLESKCADAQAESKKHSGMVSELSAEIEKFRSSMLAFESALQTASEKEIALMESLDAVKAEKRVAEEALESSAKKLKEAENLLEALHGELSVTQGKLEGIENDLKASGLRETEIIEKLKSA

Click here to download the sequence:
Link to NCBI Protein BLAST