Transcript Information: S_Transcript_338428.p1


Annotated TAIR IDAT2G33760.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14275800-14277551 | Forward length=583
E-Value1.3E-261
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87331092136171
Replicate 20.26673493420139
Replicate 30.25482191479932
Condition 2: 8 Hour
Replicate 10.92078541956533
Replicate 21.1591631419547
Replicate 31.1412629978487
Condition 3: 24 Hour
Replicate 10.26410049125071
Replicate 20.54800235245054
Replicate 30.39205250370647


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_338428.p1 GENE.S_Transcript_338428~~S_Transcript_338428.p1 ORF type:complete len:579 (+),score=96.73,PPR_2|PF13041.2|0.0033,PPR_2|PF13041.2|4.9,PPR_2|PF13041.2|8.8e-11,PPR_2|PF13041.2|1.8e-05,PPR_2|PF13041.2|1.3e-12,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|1.2e+02,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|3.7e+02,PPR|PF01535.16|0.35,PPR|PF01535.16|4.3e-07,PPR|PF01535.16|16,PPR|PF01535.16|5.6e-06,PPR|PF01535.16|7.6e-08,PPR|PF01535.16|0.00024,PPR|PF01535.16|1.6,PPR|PF01535.16|4.3e+02,PPR|PF01535.16|8.5,DYW_deaminase|PF14432.2|8.5e-40,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|7.3e-05,PPR_1|PF12854.3|0.072,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|23,PPR_1|PF12854.3|3.9e+03,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|9.5e+02,PPR_3|PF13812.2|48 S_Transcript_338428:82-1818(+)
ATGCAGGACCCTTCACCACCTCCACCCTATCAATTACTACTACGAGCGGGCCCACGTCTCAAACCACTCAAACAGGTGCACGCCTACCTAATCACCACTGGAACCCACCTCACCCGATCAATACTCACAAAGCTCGCAGCTTTGGCCTGCACTTCAAAATCCACATCCTACACCCGAAAACTCGCTTTCTCCATACCCGACCCGGATTCCTACCTCTTCAAGACCCTCATTCGCATCTCCTCCAAAGTGGGTCTCCAATACGACGCCGTTTTCTTCTACAACCGTATGCTCCACTCTCTCACCACCCCACCATCAAACTACACTTTCACTTCTGTGATCAAGGCTTGTGCTGATGTATCAGCCTTGAAGTTGGGCAAATGTGTACATTCCCATGCTTTAGTAAATGGGTTTGTGTTAGATTCTTTTGTACAGTCTTCTTTGGTTGCCTTTTATGCTAAATGTAGTGAGCTGAGTCATGCACGGAAGATGTTTGACAAAATGCCTCAAAGAAGTATTGTTGCTTGGAATGCCATGATTTCGGGGCTCGAGCGAAATGGGCATGCTAAGGAAGGGGTTGAGTTGTTTGATTTGATGAGGGGTTCGGGTGTTGATCCGGATTTGGCTACCTTTGTGAGTCTTTTATCGGCATGTGCTCAATTGGGTTCGGTTGAGCTAGGTTCTTGGATTCATGATTATATTGCGAATCATGGTTTTGAAGTGAATGTTGTTGTTGGGACAGCTTTGATTAACATGTATGCTAAATGTGGGAATGTGAGGAAAGCGAGGGAGGTTTTTGATGCGATGAAGGATAAGAATGTTGTTGCTTGGACTGCAATGATTTCGGGGTATGGAGTTCATGGCTATGGTAAAGAAGCTATCGAGCTATATGAATCAATGAAAGGTTATGGTATAGTGCCTAACGAGATCACGTTTGTGAGTGTTTTATCGGCTTGTGCTCATGCTGGGATGGTTGATGAAGGGCGCGAAATATTTTCAAGCATGAGAAGAAATTATGGTTTGGTGCCTACAATTGAGCATCATGTTTGTGTGGTTGATATGCTTGGAAGAGCTGGACTGCTTAATGAGGCTTATAGTTATGTTAAAGAGCTGAAGAAGCCAGGTCCAGCGATATGGACCGCTTTGCTAGGGGCTTGCAAGATGCACAAGAAATTCGATTTGGGTGTTAGAGCTGCTGAGCAGCTCTTAGCTATCGACCCTGCAAATCCAGGGCATTATGTTATGATATCGAATGTATATGCATTGGCTGGAAAGATGGATAGAGTAGAAAAGATTAGAAATGTGATGATAAAAAGACGCTTGAAGAAGCATGTTGGGTATAGCACAATAGAGATTGATCAAAAGACGCATTTGTTTAGCATGGGTGACAAGTCTCACCCTGAGACGAGTGAAATTTATGCGTACTTAGATGATTTGATGGGAAGGATAAGTGAAGCAGGTTATGTGCCAGCACAAGAGGCAGTCCTTCACGAGTTGGAAGAAGAGGAGAGGGAATATGCCCTTAGATACCACAGCGAGAAGCTTGCAATAGCCTTTGGTTTGTTAAAGGCTGAGAGTGGTTCTCTTATAAGGATTGTGAAGAATTTAAGGATGTGTGAGGACTGCCATTTAGCCATCAAGTTCATGTCTAGTGTTACAAATAGGGAAGTCATTGTTCGGGATAAGCTTCGTTTTCACCATTTTAAGGATGGGCTGTGCTCTTGTGCTGATTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_338428.p1 GENE.S_Transcript_338428~~S_Transcript_338428.p1 ORF type:complete len:579 (+),score=96.73,PPR_2|PF13041.2|0.0033,PPR_2|PF13041.2|4.9,PPR_2|PF13041.2|8.8e-11,PPR_2|PF13041.2|1.8e-05,PPR_2|PF13041.2|1.3e-12,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|1.2e+02,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|3.7e+02,PPR|PF01535.16|0.35,PPR|PF01535.16|4.3e-07,PPR|PF01535.16|16,PPR|PF01535.16|5.6e-06,PPR|PF01535.16|7.6e-08,PPR|PF01535.16|0.00024,PPR|PF01535.16|1.6,PPR|PF01535.16|4.3e+02,PPR|PF01535.16|8.5,DYW_deaminase|PF14432.2|8.5e-40,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|7.3e-05,PPR_1|PF12854.3|0.072,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|23,PPR_1|PF12854.3|3.9e+03,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|9.5e+02,PPR_3|PF13812.2|48 S_Transcript_338428:82-1818(+)
MQDPSPPPPYQLLLRAGPRLKPLKQVHAYLITTGTHLTRSILTKLAALACTSKSTSYTRKLAFSIPDPDSYLFKTLIRISSKVGLQYDAVFFYNRMLHSLTTPPSNYTFTSVIKACADVSALKLGKCVHSHALVNGFVLDSFVQSSLVAFYAKCSELSHARKMFDKMPQRSIVAWNAMISGLERNGHAKEGVELFDLMRGSGVDPDLATFVSLLSACAQLGSVELGSWIHDYIANHGFEVNVVVGTALINMYAKCGNVRKAREVFDAMKDKNVVAWTAMISGYGVHGYGKEAIELYESMKGYGIVPNEITFVSVLSACAHAGMVDEGREIFSSMRRNYGLVPTIEHHVCVVDMLGRAGLLNEAYSYVKELKKPGPAIWTALLGACKMHKKFDLGVRAAEQLLAIDPANPGHYVMISNVYALAGKMDRVEKIRNVMIKRRLKKHVGYSTIEIDQKTHLFSMGDKSHPETSEIYAYLDDLMGRISEAGYVPAQEAVLHELEEEEREYALRYHSEKLAIAFGLLKAESGSLIRIVKNLRMCEDCHLAIKFMSSVTNREVIVRDKLRFHHFKDGLCSCADYW*

Click here to download the sequence:
Link to NCBI Protein BLAST