Transcript Information: S_Transcript_338480.p1


Annotated TAIR IDAT5G48350.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19593566-19594165 | Forward length=199
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61179313184323
Replicate 20.76078584681086
Replicate 30.74194915278853
Condition 2: 8 Hour
Replicate 10.12255971446628
Replicate 20.2571476855141
Replicate 30.36751461387899
Condition 3: 24 Hour
Replicate 10.12554530741721
Replicate 20.39075537200599
Replicate 30.28990855638064


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_338480.p1 GENE.S_Transcript_338480~~S_Transcript_338480.p1 ORF type:3prime_partial len:174 (+),score=17.14,DNA_pol_A_exo1|PF01612.16|7.8e-06 S_Transcript_338480:187-705(+)
ATGTCAATCACTCACAAATTCAACATAGAAAACAGGGAAGTAAAAACCAAAGTAATCAGCTCCGAAGCTCAGCTTGATCAATGTCTAAGTGACTTCCTATCAACCATCTCCAAAGACACGCGATCAAAAAGAGTTGTGGGGTTAAACATTGAGAAAGAGTATGAAACCAAGCCATCGATGAGCGACAACAATCACTATCAAGTTCATGAAAGATCGACCATACTAACATTATGTTTTGGCAACACTTGCCTGATCATACAACTCCTCTCTACGAAGCTGGGATCGCTCTCGAAGTTCCTCCAACTTCCAGAGTTATCCTTCGTGGGACTCGGGATCAGGCATTGCCTCGAGGCGTTGGAGAGAGATCACGGGATCAAGTGTAGGAATGCTGTGGAATTGACTCAGCTGGCTGCAACTGTTAAGGAGACTGAAATCTATAGAGCGTATGGGCTGGTTGATTTGGCTGATAAGGTGTGTCTTTTGGATGTCAAGAAGATGATGAGTAGCTGCACTGCTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_338480.p1 GENE.S_Transcript_338480~~S_Transcript_338480.p1 ORF type:3prime_partial len:174 (+),score=17.14,DNA_pol_A_exo1|PF01612.16|7.8e-06 S_Transcript_338480:187-705(+)
MSITHKFNIENREVKTKVISSEAQLDQCLSDFLSTISKDTRSKRVVGLNIEKEYETKPSMSDNNHYQVHERSTILTLCFGNTCLIIQLLSTKLGSLSKFLQLPELSFVGLGIRHCLEALERDHGIKCRNAVELTQLAATVKETEIYRAYGLVDLADKVCLLDVKKMMSSCTAA

Click here to download the sequence:
Link to NCBI Protein BLAST