Transcript Information: S_Transcript_339072.p1


Annotated TAIR IDAT1G28690.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10080042-10081604 | Reverse length=520
E-Value7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.075272777179
Replicate 20.22285646017692
Replicate 30.55887079041214
Condition 2: 8 Hour
Replicate 10.21540798300134
Replicate 20.22597826908815
Replicate 31.0765579598475
Condition 3: 24 Hour
Replicate 10.44131077758776
Replicate 20.22892738966008
Replicate 30.2547681253042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_339072.p1 GENE.S_Transcript_339072~~S_Transcript_339072.p1 ORF type:internal len:99 (+),score=13.40,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.1e-07,PPR|PF01535.16|0.17,PPR|PF01535.16|0.37,PPR|PF01535.16|1.2e+03 S_Transcript_339072:3-296(+)
TATTTGAAGAATGGCTTTGCGGAAGATGCTGAGTTACTGTTTAAGGAAATAGCGGAGAAAGATGTTGTGGTCTTTAATGCTATGATCGAAGGTTATAGTAGATCAATTGATACCGCTAAGAAGTCGATTGAAGTCTATATAGAGATGCGGAGATTGGATTTTGTGCCTACAATCGCAACGTTTGCTAGTCTTATTGGAGCATGTTCTCTACTGACATCAGTTGAACTTGGTCAACAAGTTCAGAGTCACCTCGTACAGACTAGGTACTTCCTGGATGTAAAAATTGGGAGTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_339072.p1 GENE.S_Transcript_339072~~S_Transcript_339072.p1 ORF type:internal len:99 (+),score=13.40,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.1e-07,PPR|PF01535.16|0.17,PPR|PF01535.16|0.37,PPR|PF01535.16|1.2e+03 S_Transcript_339072:3-296(+)
YLKNGFAEDAELLFKEIAEKDVVVFNAMIEGYSRSIDTAKKSIEVYIEMRRLDFVPTIATFASLIGACSLLTSVELGQQVQSHLVQTRYFLDVKIGSA

Click here to download the sequence:
Link to NCBI Protein BLAST