Transcript Information: S_Transcript_339164.p1


Annotated TAIR IDAT1G09410.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3035443-3037560 | Forward length=705
E-Value1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26349506173446
Replicate 20.65533038289648
Replicate 30.36520269472476
Condition 2: 8 Hour
Replicate 10.42228495677491
Replicate 20.44300690375696
Replicate 30.8441919843557
Condition 3: 24 Hour
Replicate 10.2162859751544
Replicate 20.44878834804648
Replicate 30.24972321193184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_339164.p1 GENE.S_Transcript_339164~~S_Transcript_339164.p1 ORF type:3prime_partial len:101 (+),score=13.05,PPR|PF01535.16|7,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|2.9e-05,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|4.3e-07,PPR_2|PF13041.2|0.00021,PPR_1|PF12854.3|7.2,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|0.00035,PPR_3|PF13812.2|98,PPR_3|PF13812.2|5.6e-05,PPR_3|PF13812.2|2.5 S_Transcript_339164:671-970(+)
ATGGGTTGTCCAAGCAATTGCAGAAGATACTGCACTGATGTTGCTCTATCTTACAACGCTCAGATTTTCAGACATGCCCGTCATGGTGATATTCATGAATCTCGTCATCTTTTCGACAAAAAGATCGACAGAACAGTGTCTTCATGGAACTCTATGATTGCCGGTTACTTCCAAAACCATCGACCCAAGGAAGCACGCCACCTGTTCGACAAAATGCCTGAGAGAAACCTTGTTTCTTTTAACAATTTGGTATCTGGGTATGTGAAAAACAAAATGATAGATGAAGCACGTAAGATGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_339164.p1 GENE.S_Transcript_339164~~S_Transcript_339164.p1 ORF type:3prime_partial len:101 (+),score=13.05,PPR|PF01535.16|7,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|2.9e-05,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|4.3e-07,PPR_2|PF13041.2|0.00021,PPR_1|PF12854.3|7.2,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|0.00035,PPR_3|PF13812.2|98,PPR_3|PF13812.2|5.6e-05,PPR_3|PF13812.2|2.5 S_Transcript_339164:671-970(+)
MGCPSNCRRYCTDVALSYNAQIFRHARHGDIHESRHLFDKKIDRTVSSWNSMIAGYFQNHRPKEARHLFDKMPERNLVSFNNLVSGYVKNKMIDEARKMF

Click here to download the sequence:
Link to NCBI Protein BLAST