Transcript Information: S_Transcript_339895.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85848391081227
Replicate 20.99638404453293
Replicate 30.11898539408775
Condition 2: 8 Hour
Replicate 10.27516632667268
Replicate 20.86600704411845
Replicate 31.2376943770634
Condition 3: 24 Hour
Replicate 10.42280419659215
Replicate 21.3159632528202
Replicate 30.16272286712978


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_339895.p1 GENE.S_Transcript_339895~~S_Transcript_339895.p1 ORF type:complete len:155 (+),score=18.33,RVT_1|PF00078.23|6.4e-08 S_Transcript_339895:46-510(+)
ATGAAGTTGTGCAGTAGAGGTTGGCTTACACATCTTATCTTTGCAGATGATCTTTTAATATTTGCAAGAAGAGATGTACCATCTGTTAATGAAGCTGTGGTTTGTGTGAATAAGTTCTACCATATGTCTGGGTTGTTCATCAATCCACAAAAGACTAGTATATTCTTTGGAGGGGTGGACAAACAAGTAAAGAAGGAGATCTTAAATAGCACAGGATTCAGGGAGGGAAAACTGCCTGTCAGATATTTAGGCACTTCTAGCGTTACAGTCAAGATGTGTAGAGGATTGGTGGAGAAGATCAAAATTAAACTTCATCATTGGACTACCAAAACGTTGTCCTATGCAGGCAGCTTGGAGCTTGTGAATTATGTGATTTTGGGGCTGGACAGTTTCTGGTGTAGTGTGTTCTTGTTGCCAAAAGGAGTTACAGACACAATCCAAAAGTTATGCAGAAAATTCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_339895.p1 GENE.S_Transcript_339895~~S_Transcript_339895.p1 ORF type:complete len:155 (+),score=18.33,RVT_1|PF00078.23|6.4e-08 S_Transcript_339895:46-510(+)
MKLCSRGWLTHLIFADDLLIFARRDVPSVNEAVVCVNKFYHMSGLFINPQKTSIFFGGVDKQVKKEILNSTGFREGKLPVRYLGTSSVTVKMCRGLVEKIKIKLHHWTTKTLSYAGSLELVNYVILGLDSFWCSVFLLPKGVTDTIQKLCRKFI*

Click here to download the sequence:
Link to NCBI Protein BLAST