Transcript Information: S_Transcript_34026.p1


Annotated TAIR IDAT1G80270.1
Annotated Gene NamePENTATRICOPEPTIDE REPEAT 596
Annotated Gene Symbol(s)PPR596
Annotation TypeOrtholog
Chromosome Positionchr1:30181265-30183331 | Forward length=596
E-Value3.3E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.248490749979
Replicate 220.290817482817
Replicate 317.658556754062
Condition 2: 8 Hour
Replicate 128.310715019438
Replicate 224.062949009344
Replicate 325.478312334143
Condition 3: 24 Hour
Replicate 113.347739833623
Replicate 210.743003597607
Replicate 313.186958649604


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34026.p1 GENE.S_Transcript_34026~~S_Transcript_34026.p1 ORF type:complete len:635 (+),score=136.95,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|9.1e+02,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|18,PPR_3|PF13812.2|64,PPR_3|PF13812.2|0.98,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|1.2e+04,PPR|PF01535.16|0.15,PPR|PF01535.16|56,PPR|PF01535.16|9.1,PPR|PF01535.16|9.2e+02,PPR|PF01535.16|2.8,PPR|PF01535.16|0.0016,PPR|PF01535.16|1.4,PPR|PF01535.16|0.00024,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|79,PPR_2|PF13041.2|9.7,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|0.053,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|1.2e+03,PPR_1|PF12854.3|9.8,PPR_1|PF12854.3|20,PPR_1|PF12854.3|8.1e+02,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|8.1,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.76 S_Transcript_34026:231-2135(+)
ATGTGGGCTCTTCGTCGAGCTTCCACTAATTACGTCAGAGTCCAAGGGTTGAATATAGCCACTTTCCGAGCCTGTGCTGGAGTTGGAACGCTTGGAAGCGGTATAGAGGAGAAATCAAGTAGCTTCAATGGCCAAACAACTAATAGATGGATAACATCTAAAACATGTTATTGTGCATCTAAACCATGCTGTTGTGCGGTAAAAGTAGCAAATCCGTTCTTTATTGGGACTCGAGGTCTTTCTTCACAGGCTGGTGCTAAGAGTGGTGGAGAAGAAGAGGATTCCTTAGAAGAGGGGTTTTCTGAGCTTGAAATGCCAGAAGCCTCCGAGACAACCAATGTTGATATTGTAGATGAGGATACTACTTCAGATTCTGAGTCTGATGTATCTAGTGACGAGGAGAATCATGAAGAGGGCCTAGAATCTGAGCTGATGGCAGATACTGAGGCTGATTCCGAGGCCAAGACTGGCGAGAAAGGATTCAATACTAGAAAGCCTATGTCTGATCTTTGCAAGTTGATTTTGAATGAGCCAGTCCCATCTGTCTCGAAGGCTCTTGATAAGTATTTTGCTGATGGAAAGGAATTAAACCGCTCTGAGATATATGATGCTTTGAGGCACCTCCGCAGGCTCAAGCTCTTTGGGAAGGCCTTGCAGCTATCAGAGTGGCTGGATGCAAATAACGAGTTCGAATTTGTTGAGCGAGATTATGCATCTAGGGTTGATCTGATTGCCAAAGTGCGTGGTCTTCAGAAGGCAGAGAACTATGCTGATCACGTCCCAAGAGCCTACAGACAAGAGCTGGTCTACAGAACATTGCTAGCCAACTGTGTGACCACCGTCAATGTGAAAAAAGCTGAAGAGGTCTTTAATAAAATGAAGGACCTAGGGTTTCCAATGACAACCTTTGTGTGTAATCAATTGTTGCTTCTCTACAAGAGAACTGATAAGAAAAAAATCGCCGATGTACTTCTAATGATGGAGAAAGAAGATATCAAGCCCACTCTTTTTACTTACCAAGTCTTGATAGACACTAAAGGTCAAGCTAATGACACAGTGGGAATGGAACAAATTGTTGAGACTATGAAGGCTGAAGGTGTTGAACCCAATACTGGCGTGCAAGCCACTTTGGCAAAGCATTATGCCTATTGTGGACACAAAGAAAAAGCCAAGGCTGTTCTGAAGGAGATGGAAGGTAGCGACTTGAAGAAAAACCGTTGGTTGTGTTCCATTTTGCTTCCTATCTATGCCGATCTTGGCTATGCTGATGAAGTTGAAAGAATTTGGGAAGTTTGTGAGTCCAAGCCCAGACAACGTGATTACCTAGCTGCCATGGGAGCCTGGGGAAAGCTGAAGAATGTTGAGAAGGCTGAAGCTGTCTTTGATAAGTTGAAAAATTCCATGAAGAAGCTCACTTCAGTTCATTATTCTACTATGTTGAGAGTTTATGCAGACAATAAAATGTTGAACAAAGGAAAGGAGCTACTGAAGAAAATGGGTGACAGTCATTGCCACATTGGACCTTTGACTTGGGACTCGCTTGTGAAACTGTATGTGGACGCGGGAGAAGTGGAGAAAGCCGATACTGTGTTGCAGAAAGCCTCACAGCAGAATCAGCTGAGGCCATTGTTCAGCTCGTATATGGTACTCTTAGACAAATACGCTAAACGAGGTGACGTCCATAATGCTGAGAAGATATTTTATAGGATGAGACAGGCAGGCTATATCGCCCGCGTAAGGCCATTCCATGCACTCCTGCAAGCATACACAAATGCCAATACTCCAGCGTATGGGATCAGAGAGAGAATGAAGGCTGATAATTTATTCCCGAATAAGGCACTTGCTGCACAGATTTCCATGGTTGATGCATTTAGGAAGACTAGTGTGTCAGAATTGCTTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34026.p1 GENE.S_Transcript_34026~~S_Transcript_34026.p1 ORF type:complete len:635 (+),score=136.95,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|9.1e+02,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|18,PPR_3|PF13812.2|64,PPR_3|PF13812.2|0.98,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|1.2e+04,PPR|PF01535.16|0.15,PPR|PF01535.16|56,PPR|PF01535.16|9.1,PPR|PF01535.16|9.2e+02,PPR|PF01535.16|2.8,PPR|PF01535.16|0.0016,PPR|PF01535.16|1.4,PPR|PF01535.16|0.00024,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|79,PPR_2|PF13041.2|9.7,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|0.053,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|1.2e+03,PPR_1|PF12854.3|9.8,PPR_1|PF12854.3|20,PPR_1|PF12854.3|8.1e+02,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|8.1,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.76 S_Transcript_34026:231-2135(+)
MWALRRASTNYVRVQGLNIATFRACAGVGTLGSGIEEKSSSFNGQTTNRWITSKTCYCASKPCCCAVKVANPFFIGTRGLSSQAGAKSGGEEEDSLEEGFSELEMPEASETTNVDIVDEDTTSDSESDVSSDEENHEEGLESELMADTEADSEAKTGEKGFNTRKPMSDLCKLILNEPVPSVSKALDKYFADGKELNRSEIYDALRHLRRLKLFGKALQLSEWLDANNEFEFVERDYASRVDLIAKVRGLQKAENYADHVPRAYRQELVYRTLLANCVTTVNVKKAEEVFNKMKDLGFPMTTFVCNQLLLLYKRTDKKKIADVLLMMEKEDIKPTLFTYQVLIDTKGQANDTVGMEQIVETMKAEGVEPNTGVQATLAKHYAYCGHKEKAKAVLKEMEGSDLKKNRWLCSILLPIYADLGYADEVERIWEVCESKPRQRDYLAAMGAWGKLKNVEKAEAVFDKLKNSMKKLTSVHYSTMLRVYADNKMLNKGKELLKKMGDSHCHIGPLTWDSLVKLYVDAGEVEKADTVLQKASQQNQLRPLFSSYMVLLDKYAKRGDVHNAEKIFYRMRQAGYIARVRPFHALLQAYTNANTPAYGIRERMKADNLFPNKALAAQISMVDAFRKTSVSELLD*

Click here to download the sequence:
Link to NCBI Protein BLAST