Transcript Information: S_Transcript_340288.p1


Annotated TAIR IDAT5G63420.1
Annotated Gene NameRNA-metabolising metallo-beta-lactamase family protein
Annotated Gene Symbol(s)emb2746
Annotation TypeOrtholog
Chromosome Positionchr5:25400515-25405807 | Forward length=911
E-Value7.1E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2606158479822
Replicate 22.2062789557515
Replicate 31.5530725123032
Condition 2: 8 Hour
Replicate 15.7241837167041
Replicate 26.59380802013
Replicate 36.7313202963099
Condition 3: 24 Hour
Replicate 10.80481149702189
Replicate 21.7892482823432
Replicate 31.5929712255863


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_340288.p1 GENE.S_Transcript_340288~~S_Transcript_340288.p1 ORF type:5prime_partial len:190 (-),score=39.61,RMMBL|PF07521.8|4.5e-10 S_Transcript_340288:201-770(-)
AAGGATGGAAAAGCACCAATTGATCCATCAACTCTGGTGAAGGTGGAAGATATTGATGCCTATGCACCAAAAGATTTGTTGATTGTAACAACAGGCTCTCAAGCAGAACCACGTGCTGCCCTGAATCTTGCATCCTTTGGTAGCAGTCATTCCCTGAAATTAAGCAAGGAAGATGTTATTTTATATTCCGCAAAGGTCATACCTGGCAACGAAAACCGGGTAATGAAAATGTTCAACCGTATAGCAGATATTGGATCGACATTAATCATGGGCAGGAATGAGATGCTGCACACTTCTGGCCATGCGCACCGTGAGGAATTGGCGGAAGTTCTGAAGATTGTGAAGCCACAACATTTTTTGCCAATTCATGGTGAGCTTTTGTTCTTAAAGGAGCATGAGCTACTTGGAAAATCAACTGGAGTTCGGCACACAACTGTGATAAAGAATGGAGAAATGCTTGGAGTGTCCCATCTGAGAAACAGGAGGGTTCTATCAAATGGATTTATTTCCCTGGGAAAAGAAAATTTACAGGTAAGAATTGCTGTAGTTGCTTGTAAGACACATTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_340288.p1 GENE.S_Transcript_340288~~S_Transcript_340288.p1 ORF type:5prime_partial len:190 (-),score=39.61,RMMBL|PF07521.8|4.5e-10 S_Transcript_340288:201-770(-)
KDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHSLKLSKEDVILYSAKVIPGNENRVMKMFNRIADIGSTLIMGRNEMLHTSGHAHREELAEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGVRHTTVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVRIAVVACKTHS*

Click here to download the sequence:
Link to NCBI Protein BLAST