Transcript Information: S_Transcript_34057.p1


Annotated TAIR IDAT3G58030.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21485527-21486837 | Forward length=436
E-Value8.7E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.667583479112
Replicate 246.51074555368
Replicate 350.094458821672
Condition 2: 8 Hour
Replicate 166.137528078135
Replicate 261.169874433847
Replicate 351.129229052489
Condition 3: 24 Hour
Replicate 158.843424898087
Replicate 252.984316252812
Replicate 349.478379902829


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34057.p1 GENE.S_Transcript_34057~~S_Transcript_34057.p1 ORF type:complete len:444 (+),score=97.95,zf-C3HC4|PF00097.21|3.5e-08,zf-C3HC4_2|PF13923.2|2.6e-07,zf-C3HC4_3|PF13920.2|2.8e-07,zf-RING_5|PF14634.2|1.2e-05,zf-RING_2|PF13639.2|1.2e-05,zf-C3HC4_4|PF15227.2|1.4e-05 S_Transcript_34057:740-2071(+)
ATGGGTGATCGAACTGAAGATATGATGGATTTAGATTTAAATTTAGGGCCAATTGGGCCAGCATCTCCATTGATAGGTGGTCCGGGAACGGGAACGGGAACGGGACCGTCGTCAGGGGAGGAGTCTGTGAACTTAGATGGGTGGGTGGAACAACCTTTTCTTATCAGGGAAGCTCTTAGGCAAAGGACTCGACAACGTTGGCGTTGGAGGCATCTTCAGATACCCTTAGCTGCTCAACTAAGATTGACTGTCGATTCTGATGGTGGCGGTAGTGGTCCTGGTGATGGTGATGGTGAGAATGGTGATGGTGGAGACGGCGGTGCTAATGGTGGGCGCGGTGCTGGGACATTGCAAGCTGGGGAAGGGAGTGTACCTGCAGAAGAAAGGAGCCGTGAAACTGCGAAAACGTGTGAGAATCATGTGACATTGAGTGAGAGCGGTTCAGTTGATGAGAAGGCGGATGTTGAGAAGAGTGGGGGCGAGGAGGGGAGCTTTTTCGATTGTAATATATGCTTGGACTTGGCTAAGGAACCTGTTGTTACTTGTTGTGGTCATTTGTTTTGTTGGCCGTGTATTTATAGCTGGCTCCATGTTTACTCTGATGCAAAGGAATGCCCTGTTTGTAAAGGAGAGGTCACTCTTAAGAATGTTACACCGATTTATGGGCGTGGGAATCATACACGCGAACCGGAAGAGGATACTGGTATTAAGATCCCCGTGAGACCCTCAGCACGACGGGTTGAGAGTTTGAGGCAAACCATTCAGAGGACAGCCTCGACTTTCCCAATGGAAGAGATGATTCGGCGTCTAGGAGCCCGATTTGAGCTGACAAGGGACTTCTTTCAGCTCCCTGATCCTGATGGCAATCGTGATCCTCTCGACAGGAGTTCTGTGCTGAACAGGTTTTTGACTTCCCGTGCATTGCGAAGGGAACAAAGTCCGATTGTTCCCCCTCCGGAGGATGTTGTGGATTTGAGTCAGGACAGGGCTGAGGCTATGGGACAACGAAGGCTCCCACCTTTAACTTATAGAAGGGGACAATCACACAGAGGTATTTCACCTCTTAATGAAAGGTTTGTTGACGCATATCTCCGCAGGTCTTCTCCAGCAAGAAGCCAAGAGCTACAGCCGCCGTCAATGGATGACAGGGATTCCTTCTCAAGCATTGCTGCTGTCATACATGGAGAGAGCCAAACAGTGGATACAGCTGTGGAGATTGACTCGATGGTCTCCCTTTCTACATCATCTTCACGACGAAGAAATGATCCTTCTAGAGCCTCAGATGTTGATAGTGGGGATTCTCGTGCACAGAGGAGGAGAAGATTGAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34057.p1 GENE.S_Transcript_34057~~S_Transcript_34057.p1 ORF type:complete len:444 (+),score=97.95,zf-C3HC4|PF00097.21|3.5e-08,zf-C3HC4_2|PF13923.2|2.6e-07,zf-C3HC4_3|PF13920.2|2.8e-07,zf-RING_5|PF14634.2|1.2e-05,zf-RING_2|PF13639.2|1.2e-05,zf-C3HC4_4|PF15227.2|1.4e-05 S_Transcript_34057:740-2071(+)
MGDRTEDMMDLDLNLGPIGPASPLIGGPGTGTGTGPSSGEESVNLDGWVEQPFLIREALRQRTRQRWRWRHLQIPLAAQLRLTVDSDGGGSGPGDGDGENGDGGDGGANGGRGAGTLQAGEGSVPAEERSRETAKTCENHVTLSESGSVDEKADVEKSGGEEGSFFDCNICLDLAKEPVVTCCGHLFCWPCIYSWLHVYSDAKECPVCKGEVTLKNVTPIYGRGNHTREPEEDTGIKIPVRPSARRVESLRQTIQRTASTFPMEEMIRRLGARFELTRDFFQLPDPDGNRDPLDRSSVLNRFLTSRALRREQSPIVPPPEDVVDLSQDRAEAMGQRRLPPLTYRRGQSHRGISPLNERFVDAYLRRSSPARSQELQPPSMDDRDSFSSIAAVIHGESQTVDTAVEIDSMVSLSTSSSRRRNDPSRASDVDSGDSRAQRRRRLN*

Click here to download the sequence:
Link to NCBI Protein BLAST