Transcript Information: S_Transcript_340846.p1


Annotated TAIR IDAT5G57070.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23096221-23097948 | Forward length=575
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44781492463044
Replicate 21.060711036419
Replicate 30.48766850221059
Condition 2: 8 Hour
Replicate 11.4866257673001
Replicate 21.3444620576759
Replicate 31.9471206946858
Condition 3: 24 Hour
Replicate 10.42009391328066
Replicate 20.32688189773578
Replicate 30.66692905878913


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_340846.p1 GENE.S_Transcript_340846~~S_Transcript_340846.p1 ORF type:3prime_partial len:416 (+),score=104.31 S_Transcript_340846:277-1521(+)
ATGGATGAAATGGAAGAAGACCCACCTCCTTTCTGGCTGCAGAGCAACACTGCTCGGCGCCACCACGCCAAACACCACCGTCGTTGCCAGAGTCAAGTGTCGTCCCTCTTCCTCAACACCGGAGTTTTGGTCATAGTCTTGCTGGGTGCTGCTGTTGTTTTCCTGGTCATTGTGATTCCTTCAGTTCTGTCTCTTGCACGCCAAGTCTTCAATCCAAGCCTGGTGAAGAGTAGCTGGAACTCCCTCAATATTATACTTGTTCTGTTCGCAATCATTTGTGGGTTTCTTGGTAGGAGGGATGATGAGGATCAGGTTTCTGCAACTAATACTCCCAGGAAAAGGGAGGCAGATCAACCTGCGGGGTCGAGCCCACGTCAATGGTATGACTACCAAGGTCGAGTGGCATATAATAGCTTTGGTAATGCAGATACTATAAGGAAGGTTATTAGGAGGAATAGCAGCTCATACCCAGATCTCAGGCAAGAGTCTCAGTGGGTGATAAGAGAGAATAATATGTGGCGCTCTTATGATGATATTGATGTGCTTAATCCTCGGGTTCTGAGATCTGATAGTCAGATTACCTATCATAGAACTCTTACAGAAGTGGATGAGGATGAAGATGATGCCAAAACTATTGAGGTGGATGTTGGTGAAAGTCAAGATTCATCCCCATCAACTCCACCACCACCACCATCCCCATCACCTCCACCCCCTCCCCCGCCACTGCCGCCACCGCAGCCAGCAGCTAGAAAAACCGTATATGGTAGATCTAAAATAGCAGTTGATGAGGCTGAAGTTATTGCCAAAAAGATTGAGATAGATGCTTTCATAGGTAATCAAGCAAAATATTTGCCTCCTTCAAATCAACGATCAGTGCCATGCCCATCACCACCTGTTCATCAACCAACTACTCCGCCATCACCACCAGCATATATACGACCACCGCCATCATCACCATCATATTACTGGCCACCGCCATCGCCAACCTCCTATGTGTGGCCTCCACCATCGCCGCCACCGCCACCACCACCGCCACGCCTACGAATGCAATCATCAGCTACAGATAGAAAGAAAACAAAGCGAACATATGAAACAATTGGGCGTCAAAGCAAATGGGAAAGCTCTACCAAAAGGGAATCCATTCCAAGGGTTCAAGTACCACCATCGCCCCCGCCTCCTCCTCCACCACCACCACCACCACGGCGACAATCACGACCATTGGCAAGCCAATATGAAAAGGATAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_340846.p1 GENE.S_Transcript_340846~~S_Transcript_340846.p1 ORF type:3prime_partial len:416 (+),score=104.31 S_Transcript_340846:277-1521(+)
MDEMEEDPPPFWLQSNTARRHHAKHHRRCQSQVSSLFLNTGVLVIVLLGAAVVFLVIVIPSVLSLARQVFNPSLVKSSWNSLNIILVLFAIICGFLGRRDDEDQVSATNTPRKREADQPAGSSPRQWYDYQGRVAYNSFGNADTIRKVIRRNSSSYPDLRQESQWVIRENNMWRSYDDIDVLNPRVLRSDSQITYHRTLTEVDEDEDDAKTIEVDVGESQDSSPSTPPPPPSPSPPPPPPPLPPPQPAARKTVYGRSKIAVDEAEVIAKKIEIDAFIGNQAKYLPPSNQRSVPCPSPPVHQPTTPPSPPAYIRPPPSSPSYYWPPPSPTSYVWPPPSPPPPPPPPRLRMQSSATDRKKTKRTYETIGRQSKWESSTKRESIPRVQVPPSPPPPPPPPPPPRRQSRPLASQYEKDK

Click here to download the sequence:
Link to NCBI Protein BLAST