Transcript Information: S_Transcript_341045.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value1.2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4951124289427
Replicate 20.74368953564657
Replicate 30.41444350749664
Condition 2: 8 Hour
Replicate 11.198055635794
Replicate 21.2568454291981
Replicate 31.1975195283697
Condition 3: 24 Hour
Replicate 11.4726887746468
Replicate 22.0371965461885
Replicate 32.2671500588868


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_341045.p1 GENE.S_Transcript_341045~~S_Transcript_341045.p1 ORF type:5prime_partial len:89 (+),score=7.15 S_Transcript_341045:1-267(+)
TCACTTCTCCATATCAATGGGTATATTGATCGTATCGCTAATTCTAAGTGGGAAGTCAAAGAGCTTGGAATGGAGCACAATGGGTATGTAATCTTGATCTTCTTTGTGAGTGCTATGACTACCACCGTCCCCCTTTTTTTCTTTTACACCAACTCAAAATTGGACGTCCTAAATTCATCTTTACATTGCTCTGGTAAAAATTTGAATTTAAAGGCAATTTCACCCTTCTTTTTCTTCTTTCCTCCTTTTGAAGATATGCCAACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_341045.p1 GENE.S_Transcript_341045~~S_Transcript_341045.p1 ORF type:5prime_partial len:89 (+),score=7.15 S_Transcript_341045:1-267(+)
SLLHINGYIDRIANSKWEVKELGMEHNGYVILIFFVSAMTTTVPLFFFYTNSKLDVLNSSLHCSGKNLNLKAISPFFFFFPPFEDMPT*

Click here to download the sequence:
Link to NCBI Protein BLAST