Transcript Information: S_Transcript_34116.p1


Annotated TAIR IDAT3G15070.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5070472-5072344 | Reverse length=486
E-Value5.2E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.508324858456
Replicate 210.295968460174
Replicate 310.334578237837
Condition 2: 8 Hour
Replicate 112.4878411767
Replicate 214.713017573874
Replicate 313.634461080664
Condition 3: 24 Hour
Replicate 110.391079714445
Replicate 210.372266919626
Replicate 311.815732514108


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34116.p1 GENE.S_Transcript_34116~~S_Transcript_34116.p1 ORF type:complete len:555 (+),score=119.42,zf-RING_2|PF13639.2|4.6e-12,zf-rbx1|PF12678.3|4.2e-08,zf-C3HC4|PF00097.21|1.3e-07,zf-RING_11|PF17123.1|3.7e-06,zf-RING_11|PF17123.1|6.6e+03,zf-C3HC4_2|PF13923.2|1.2e-05 S_Transcript_34116:826-2490(+)
ATGAATGAAAGGAATATGTTATGTAGTAGCCATCAGATCCTTGATTTTGTGAATGGGCAGCAAGCTCAGAGCCATCTCCATCCTGAGCCCTGTGTTCTCCTGGGCAGCACATCAAGCTTTCCCCCGTCAACTATTAATCCTGTCTTACCATCTTCAGGAAATATGAACAACTTTGATCTCCATCATTTGCCAGAGCATCCCAGTGGTCCTGCTTTTTATGGAATGGCACAGTATAGTCAGCCGAACCACCCTGCAACAAATCTTGAATTAGGTGTTCCTACAGCATCTAGCTTCTTTAATGCTCACATGAACCCCGCATCTGGTGCAAGAGTGTTCCCTGTTCCTCTTAACCATGGTTTTGTGGATCAATTACCATCTTCTAGCAATCACAGAGGTAATGCGATTCCCTTTAGTGAGCATGGAATGGGTAATTTCTCAACAGATGGTGCTAGAGGCATATGTAAGAGAAAGAATGCTGAAGGCATCCCTGGGAACGTTCAGCATTTTGGTTCTTCTGCAGGACCTAGTAGTTCTTCAGCTATACCAATGACAAGCTGTCATTTTGATTCTGGTGCTGCTGCTTTAGAAGCCCCAACTGCCTTGCCCGACTATAGAGGTAATGGCTCTCCCCCGATCATGGAAGTAGGTTCAGGAAGTTCTGGCAGGCACAGATCTGGTGCTGTTGGACTTCATATGGATTCTGCTATGGTACATAACTATAATTATCTACGACAAGGAAATTATGGGGGCCAACCGTTTCAGCCATCCAGTTGTACATGGTTGGAACAACCCCCAATTAACAATGGTGGTGCTTTTTCATGGAGTGCACCTCCTCTGTTGCCTTATTTTCAAGGTAGCAATATGCATGGGGGCTCTTCTGAGATGGGAAATGCTGGTCTACCTGGATATCCTGAGGCGTCTAACAGTCATGGCTCTGCAAGTTTCTTGCATTCACCACCCATGCTTCCACAACACCACAATCTTCATCCATCGCAAAATATCTCTGGAGTGAGAAGATATGGTGTTGCTTGCTATCCTCCTTTCCCTCCTCCAGCTCCAAGTGGAGTTCCTACAAATGATGGTATTCAGCATGATCCCCTATGTCTCCCCCAAGAAAGTGCAGAGCCAGCAAGTCGACCAACAGGGATTAGGATATACCGGTCTCATGGAAGAAGCCTCTTGCCTGATGCAGCTTCTAGGCGCCGCGATCTTCCTCGGTTAAGGACTCTCCCTGCCGATAGAGTTGCACTTTTGGAATTCCCAAGTTTCTATGAAGTAGATTATGAAGTAGACAATTTCATCGATCATCACAGAGATATGCGGTTGGATATTGACGACATGTCATATGAGGAGCTTCTTGCTTTGAGTGAGCGGATTGGAACTGTAAACACTGGACTTTCAGAGGAAGACATCACACGCCATCTTAAAACCAGACTATATAGTTCAACTTCAGCTGCTATCAATCTGGAGGAGTTGCCTTGTGTCGATCAGAACAATGATTCATGCATCATATGTCAGGATGAATACGAGGACAAAGCCAAGCTGGGAACCCTAGAGTGTGGACATGAGTACCATGTTGATTGCTTGAAGAAATGGCTGATTGTGAAGAACGTCTGCCCCATTTGCAAATCATCCGCCTTGACTGTGGAGCACAAGGTCCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34116.p1 GENE.S_Transcript_34116~~S_Transcript_34116.p1 ORF type:complete len:555 (+),score=119.42,zf-RING_2|PF13639.2|4.6e-12,zf-rbx1|PF12678.3|4.2e-08,zf-C3HC4|PF00097.21|1.3e-07,zf-RING_11|PF17123.1|3.7e-06,zf-RING_11|PF17123.1|6.6e+03,zf-C3HC4_2|PF13923.2|1.2e-05 S_Transcript_34116:826-2490(+)
MNERNMLCSSHQILDFVNGQQAQSHLHPEPCVLLGSTSSFPPSTINPVLPSSGNMNNFDLHHLPEHPSGPAFYGMAQYSQPNHPATNLELGVPTASSFFNAHMNPASGARVFPVPLNHGFVDQLPSSSNHRGNAIPFSEHGMGNFSTDGARGICKRKNAEGIPGNVQHFGSSAGPSSSSAIPMTSCHFDSGAAALEAPTALPDYRGNGSPPIMEVGSGSSGRHRSGAVGLHMDSAMVHNYNYLRQGNYGGQPFQPSSCTWLEQPPINNGGAFSWSAPPLLPYFQGSNMHGGSSEMGNAGLPGYPEASNSHGSASFLHSPPMLPQHHNLHPSQNISGVRRYGVACYPPFPPPAPSGVPTNDGIQHDPLCLPQESAEPASRPTGIRIYRSHGRSLLPDAASRRRDLPRLRTLPADRVALLEFPSFYEVDYEVDNFIDHHRDMRLDIDDMSYEELLALSERIGTVNTGLSEEDITRHLKTRLYSSTSAAINLEELPCVDQNNDSCIICQDEYEDKAKLGTLECGHEYHVDCLKKWLIVKNVCPICKSSALTVEHKVR*

Click here to download the sequence:
Link to NCBI Protein BLAST