Transcript Information: S_Transcript_3413.p1


Annotated TAIR IDAT5G38660.1
Annotated Gene Nameacclimation of photosynthesis to environment
Annotated Gene Symbol(s)APE1
Annotation TypeOrtholog
Chromosome Positionchr5:15473285-15475497 | Reverse length=286
E-Value4.5E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1131.88657069685
Replicate 2145.15850103708
Replicate 3143.73084357404
Condition 2: 8 Hour
Replicate 1117.32899248282
Replicate 2114.91370223801
Replicate 3109.25355100856
Condition 3: 24 Hour
Replicate 1171.61533930434
Replicate 2168.09690504966
Replicate 3161.66306690659


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3413.p1 GENE.S_Transcript_3413~~S_Transcript_3413.p1 ORF type:complete len:271 (+),score=41.79,DUF2854|PF11016.4|1e-48 S_Transcript_3413:356-1168(+)
ATGCCTCTAACTCTAAGAACAGCAGCTCCAATTTGTGCTTCTTGTAATCACTTTCTCTCTCCTCATAAGCACCACCACCAGCAATCCTTAACATCACCTGTACCCACCACCGCCCTCACTGGTCTCCCTTTAAGACTCACCTCTAAACGACGTGGTTCTATTGTCGTAGCTGAAGCTGTCGATTCCTCCTCTCAACCCTCCACTGTCGCCGCCACCAAGTCTGTTGTTCCCGATGATCAGTTTTCTCTCTCAAATATTTCATTTGGTGTTGTGGGACTTGGAAGTGGAGTTACACTACTCGCATATGGGTTTGGTGCTTACTTTAATATCCTGCCTGGATCGGAGTGGTCAGCGCTCATGTTGACTTATGGATTCCCTGTTGCGGTTATTGGCATGGCTCTCAAGTACGCAGAGCTTAAACCTGTACCATGTGTTACTTATACTGATGCTCAAGCGCTGAGGGAAAAGTGTGCAACGGACATTCTGAAGCAGGTCAAGTTCGATGTGACTAGATTCCGCTATGGAGATGAGCAACATCTTGACGAGGCCTTGAAACGGATATTCCAATACGGTCTGGGTGGAGGTATCCCACGGAGAAGTGCTCCCATTCTGCAAATGATTCGTGAAGAAGTAACTGAAGATGGCAGATATTGTTTAGTTCTAGTGTTTGCGGCAAAAGATCTGAAGCTTTCAGATTTTGAACAAAGACAGGCCAAGTTCACGTCATTCTTTGGACCAGGGATTACAGCTGAAGTGGGAACAGGAGAAAATGATCTTTATGAAGTTCGATTAATATCTAACACACCAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3413.p1 GENE.S_Transcript_3413~~S_Transcript_3413.p1 ORF type:complete len:271 (+),score=41.79,DUF2854|PF11016.4|1e-48 S_Transcript_3413:356-1168(+)
MPLTLRTAAPICASCNHFLSPHKHHHQQSLTSPVPTTALTGLPLRLTSKRRGSIVVAEAVDSSSQPSTVAATKSVVPDDQFSLSNISFGVVGLGSGVTLLAYGFGAYFNILPGSEWSALMLTYGFPVAVIGMALKYAELKPVPCVTYTDAQALREKCATDILKQVKFDVTRFRYGDEQHLDEALKRIFQYGLGGGIPRRSAPILQMIREEVTEDGRYCLVLVFAAKDLKLSDFEQRQAKFTSFFGPGITAEVGTGENDLYEVRLISNTPA*

Click here to download the sequence:
Link to NCBI Protein BLAST