Transcript Information: S_Transcript_341477.p2


Annotated TAIR IDAT3G54490.1
Annotated Gene NameRNA polymerase II fifth largest subunit, E
Annotated Gene Symbol(s)RPB5E
Annotation TypeHomolog
Chromosome Positionchr3:20173673-20175297 | Forward length=233
E-Value8E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.39491463550246
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_341477.p2 GENE.S_Transcript_341477~~S_Transcript_341477.p2 ORF type:complete len:108 (-),score=14.49,RNA_pol_Rpb5_N|PF03871.10|2.4e-11 S_Transcript_341477:216-539(-)
ATGGCCGTCAAAGGAGACAGGGATGGCTGCATAGCCCACTTGGTGGCGGCCAATGGAAGCGTTGAGAGCCACCAGTTCTACTTGGCACATAAAACCCTCTTTCAGAAGCTCAATGACAGAGGCTACGCTGTTTCTTCTTCTGAAATGACTCATTCTCTTTCTGATTTCCATTCCAAGTTTGGCCATAAACCCAGCACCGAAACCCTTTGCTTTGCTGTCCCTCTCAAGTTTAACCCCTCTTCTAAGGTGCTCTATAATTTTCTGTCTCTTCTCTTTCCTTTTCGTGGTCTTTCATTTTACATTATTGTGTTTTTTTGGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_341477.p2 GENE.S_Transcript_341477~~S_Transcript_341477.p2 ORF type:complete len:108 (-),score=14.49,RNA_pol_Rpb5_N|PF03871.10|2.4e-11 S_Transcript_341477:216-539(-)
MAVKGDRDGCIAHLVAANGSVESHQFYLAHKTLFQKLNDRGYAVSSSEMTHSLSDFHSKFGHKPSTETLCFAVPLKFNPSSKVLYNFLSLLFPFRGLSFYIIVFFWL*

Click here to download the sequence:
Link to NCBI Protein BLAST