Transcript Information: S_Transcript_341656.p2


Annotated TAIR IDAT3G25720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9380234-9381405 | Forward length=282
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17114470247704
Replicate 20.35470722761278
Replicate 30.41510981538651
Condition 2: 8 Hour
Replicate 10.6857038687181
Replicate 20.50354643240542
Replicate 30.34269851454954
Condition 3: 24 Hour
Replicate 10.28096313171182
Replicate 20.29149596882762
Replicate 30.64879856990652


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_341656.p2 GENE.S_Transcript_341656~~S_Transcript_341656.p2 ORF type:complete len:311 (+),score=42.25,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|4.6e+03,zf-RVT|PF13966.2|1e-14 S_Transcript_341656:3869-4801(+)
ATGTTACCAAAGAAAACTCTGATGCTTATTGAAAAGATGTGTAGAAGGTTTCTTTGGGGGATAAAAGATGATGAGAGGAAGATGCTCTTTATGGCGTGGCATAATATTTGTAAAGAGAAGAAGCAAGGGGGCTTGCATATAAAGGAGATACTTAACTGGAATAAAGCATTAATCCTCAAATGGATAGCAAAATTGCACTCAGGGGTTGATTCCCTATGGAAAGAATGGTGTCACAACTACTATCTTAAAGATAAGAGGTTTTGGGAGATCAAATCCAGAAAAGTGGACTCTTGGGCTTGGAGAAAATTGCTCAATGTTAGATATGAGTTCACAGCAATGGTTGGAAATACCAGGGCTGTAGAACTGCTACAAGGATGGGCAGACACTGGCAAAGTAACTGGACGTGCCTATAGGATCTTCCGAGGTGATATGCCAAAGAGGATATGGGTGTCTATAGTTTGGGATCAGGTGATCATGCCAAAATACTCAATTATTGCTGTCATGGCTCTATCCAATGGCCTTCCCAGTCAAGCAAACATACAGAAGAGAGGAATGTTTATTGTAAATAGATGTATTCTCTGCTGCAATCACCAGGAGGATGTTGATCATCTGTTCTTCATCTGTTCTTACTTTAATCAGGTATGGAGAAAGGTGCTAAATTGGATAAGAGTTTATAGGAGAGGTCTGAGTCTTAAGGGTGAGATGAAATGGTTCAAGAAATTTGTGAAGGGATGTCGCTGGGACAAAAAGCTCAAGAGATGTGCTCTCTTAACTACCATCTATAAGCTTTGGAAGGACAGGAATACTAGGACCTTTGAAGACAAAAGCAGAGATGAACAACAGCTGTTTCATAAGATCAAATTCAATGTTGCAACTAGAATGTTGAATGTAGAGGGCTTAACTTCGGATAGTAAGACTACTTTCTTACTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_341656.p2 GENE.S_Transcript_341656~~S_Transcript_341656.p2 ORF type:complete len:311 (+),score=42.25,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|4.6e+03,zf-RVT|PF13966.2|1e-14 S_Transcript_341656:3869-4801(+)
MLPKKTLMLIEKMCRRFLWGIKDDERKMLFMAWHNICKEKKQGGLHIKEILNWNKALILKWIAKLHSGVDSLWKEWCHNYYLKDKRFWEIKSRKVDSWAWRKLLNVRYEFTAMVGNTRAVELLQGWADTGKVTGRAYRIFRGDMPKRIWVSIVWDQVIMPKYSIIAVMALSNGLPSQANIQKRGMFIVNRCILCCNHQEDVDHLFFICSYFNQVWRKVLNWIRVYRRGLSLKGEMKWFKKFVKGCRWDKKLKRCALLTTIYKLWKDRNTRTFEDKSRDEQQLFHKIKFNVATRMLNVEGLTSDSKTTFLL*

Click here to download the sequence:
Link to NCBI Protein BLAST