Transcript Information: S_Transcript_342086.p1


Annotated TAIR IDAT1G52140.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19407559-19408185 | Reverse length=208
E-Value5E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.96091868075
Replicate 215.009930600604
Replicate 39.1457830578511
Condition 2: 8 Hour
Replicate 13.3211673444715
Replicate 21.7420701809623
Replicate 32.7081609662067
Condition 3: 24 Hour
Replicate 15.3716926616215
Replicate 27.1521044728637
Replicate 34.5482375156767


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_342086.p1 GENE.S_Transcript_342086~~S_Transcript_342086.p1 ORF type:3prime_partial len:244 (+),score=39.00,DUF761|PF05553.7|4e-07 S_Transcript_342086:72-731(+)
ATGGAAATAGAGCCAACAAGCAGTGGTCAAGTTATAGCAAAGAAGGTATGGAGTATTCTAAGAATAATGTTGATGATGGTTAAGAAAGGCATTTCCAAGAGCAAGTTAATATTGGACCTTAACTTGCTCTTGAAGAGGGGCAATCAATTGGCTGGTAAAGCCATAAATGGGCTCATCATCCACCACAACTCCCTCATTTGCAAGCCCAACCACCCTAACCACCACTTCATCAGTCCCAATGAGTATGAATTCAGCTGTAGTAACAGCCCTGCTGTGGGCCCCATCCACCAATACCTCATGACCATGGCCCAATACAAGAAGCCTGTCTTGGGCCGGCCCAAACCCCATCGCAACCGCTACTCCCACCCTCTCGAGGACCCCAACACGGTTGCTGCCGTCCAACGGGTCCTCGAGATGATGAACCCTGAGGTCCCACCAGCTGTCTCACCCTTAAGCTTACCTGGGTTCGGAAAAAGCCCAATGGCCAGGCAGCTTAGGGTAACAGACTCCCCTTTCCCATTAAAGCATGGGAAAGGAAACACGGAAGAAGATGAGGAAGATGTCAAGGTTAATAATGCTGCTGAGGAGTTCATTAAGAAGTTCTATAACAATTTGAAGATGCAAAAATCATTGGATTCGCCTTGCCATATGTGGGCTAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_342086.p1 GENE.S_Transcript_342086~~S_Transcript_342086.p1 ORF type:3prime_partial len:244 (+),score=39.00,DUF761|PF05553.7|4e-07 S_Transcript_342086:72-731(+)
MEIEPTSSGQVIAKKVWSILRIMLMMVKKGISKSKLILDLNLLLKRGNQLAGKAINGLIIHHNSLICKPNHPNHHFISPNEYEFSCSNSPAVGPIHQYLMTMAQYKKPVLGRPKPHRNRYSHPLEDPNTVAAVQRVLEMMNPEVPPAVSPLSLPGFGKSPMARQLRVTDSPFPLKHGKGNTEEDEEDVKVNNAAEEFIKKFYNNLKMQKSLDSPCHMWAN

Click here to download the sequence:
Link to NCBI Protein BLAST