Transcript Information: S_Transcript_342300.p1


Annotated TAIR IDAT3G61490.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22758439-22760137 | Forward length=476
E-Value3.9E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8927175255631
Replicate 23.3573810196218
Replicate 32.5392172868725
Condition 2: 8 Hour
Replicate 10.77265906946134
Replicate 20.64845938086164
Replicate 31.3901639742379
Condition 3: 24 Hour
Replicate 12.2161476004951
Replicate 24.2699934853988
Replicate 32.7415265657735


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_342300.p1 GENE.S_Transcript_342300~~S_Transcript_342300.p1 ORF type:internal len:138 (-),score=31.28,Pectate_lyase_3|PF12708.3|2.4e-09 S_Transcript_342300:3-413(-)
GGAGAATGTAGGAAAACAAGGGTGTTAGAAGAGTATACTTCTACATCATTTGAGTACCCTGCCTTAAACTGCAGGGCTCACAGTGCATCTTTGGCTGAGTTTGGAGGAGTTGGTGATGGGAAAACTCTGAACACCAAGGCATTTCAAGATGCAATTAATCACTTAAGCCAATATGAAAATGATGGAGGTGGTCAGCTCTTTGTTCCTCCAGGAAAATGGTTAACTGGAAGCTTCAATCTCACCAGCCACTTCACTCTTTACCTTCATAGGGATGCTGTTCTCCTTGCTTCTCAGGTCTGTCTTTTACTCAATGGTTCCCTCTTCTTTTTTAGGTCTTGTTCTGCTTTATGTCCAATTTTAGTGGAGTTGAAAGCTACTGTTGACAGGTTTACAAATTTGGATTTTAGTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_342300.p1 GENE.S_Transcript_342300~~S_Transcript_342300.p1 ORF type:internal len:138 (-),score=31.28,Pectate_lyase_3|PF12708.3|2.4e-09 S_Transcript_342300:3-413(-)
GECRKTRVLEEYTSTSFEYPALNCRAHSASLAEFGGVGDGKTLNTKAFQDAINHLSQYENDGGGQLFVPPGKWLTGSFNLTSHFTLYLHRDAVLLASQVCLLLNGSLFFFRSCSALCPILVELKATVDRFTNLDFSG

Click here to download the sequence:
Link to NCBI Protein BLAST