Transcript Information: S_Transcript_342556.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value6E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52182355363099
Replicate 20.43260371681402
Replicate 30.54243341422355
Condition 2: 8 Hour
Replicate 10.41814490817908
Replicate 20.65799554822725
Replicate 30.41795779617611
Condition 3: 24 Hour
Replicate 10.21416552441759
Replicate 20.44438846228132
Replicate 30.74182483544459


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_342556.p1 GENE.S_Transcript_342556~~S_Transcript_342556.p1 ORF type:5prime_partial len:102 (-),score=8.23,zf-RVT|PF13966.2|5.2e-06,zf-RVT|PF13966.2|3.7e+03 S_Transcript_342556:29-334(-)
AACGATATGTTGCAGAGGCAGAGGCCGGCGTGTTGTCTTTCCCCTGATGTTTGCATTATGTGTGGCGAAAGTAGGGAATCGACGGCTCACCTTTTTTTGCATTGTAAGGTGGCGCAGAGTTTGTGGCGAAAGCTTTTTGGGGTGAAGGGGGAGGTTGTGGTGTTTCTCTCCAATGTCCTTGAGTTATTACAGGTTTATTGGGTGGGCTTTGGGAGATATAGGGAGTTGAAGCTCCTTTGGAGGAGCGCTGTCCTTGCCACGCTGTGGTGTATTTGGCTTGAACGTAATGGTAGGGTATTCTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_342556.p1 GENE.S_Transcript_342556~~S_Transcript_342556.p1 ORF type:5prime_partial len:102 (-),score=8.23,zf-RVT|PF13966.2|5.2e-06,zf-RVT|PF13966.2|3.7e+03 S_Transcript_342556:29-334(-)
NDMLQRQRPACCLSPDVCIMCGESRESTAHLFLHCKVAQSLWRKLFGVKGEVVVFLSNVLELLQVYWVGFGRYRELKLLWRSAVLATLWCIWLERNGRVFS*

Click here to download the sequence:
Link to NCBI Protein BLAST