Transcript Information: S_Transcript_34288.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2005865218878
Replicate 20.24882845365618
Replicate 30.554668754394
Condition 2: 8 Hour
Replicate 11.5232421655095
Replicate 21.9344079650891
Replicate 31.2821562469162
Condition 3: 24 Hour
Replicate 10.57486535501564
Replicate 20.2556068974776
Replicate 30.37927886323483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34288.p1 GENE.S_Transcript_34288~~S_Transcript_34288.p1 ORF type:3prime_partial len:266 (+),score=34.14,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|3.8e-12,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|8.7e-05,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.0064,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|4.6e-09,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.088,PPR|PF01535.16|0.058,PPR|PF01535.16|0.0039,PPR|PF01535.16|0.00059,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|20 S_Transcript_34288:297-1091(+)
ATGGCTATGGCTGTCAAAGCTTCATCATCTTCCCTCCATCTCCATGTCGGTAAATTCTATCCCCAATACCTCTTCTTCTCTCCATTTCACTTTCAATTTCTGTTTTGCCCATATACATGTACTAAATGTTACTCCACTTCTATTCCAAGAAATTACATTCACGCTCACCCTCTATCGTTCCTGGAATCAGTGAAGCAGCAATCCAAATTAGGGTTTAGAGACTTGGACCTGCCTTTGTCTCTCTTTAACCAAATGACCTCTTTGCGACCTCTCCCTTGTGTTGTTGATTTCAACCAGCTCTTTACCGCCATTGCCAAGATGGAGAAAGCCCACCAACCTCACTCTTACTCCAGTGCCATCTCTCTTTCTAGGCAACTGGAGTTGTCAGGCCTTCGACCCGATCTTTATTTTCTCTCCATCCTCACCAAATGTTACTGTCAATTGGGTCGTGTTGATTTGAGCTTCTCTCTTTTGGGTAAGATCCTGAAGCTTGGCTACCCCCCTGATACTGTACTCTTCACTACCTTACTCAATGGTCTTATCCACTCTGACAACCTCCCTCAGGCTGTTAACTTGTTGGATAAAATTGTCAAGCTTGGTATCCAACCTGACATTGTTACCTGTGGCACTATGATCAAAGGCCTTTGTAGAATTGGCGACAATGCTGGTGCTCTCCGCTTGCTCGGGAACATGGACCGTTCTGCCCTTTGTAAGCCCGACCTTGTCATTTACAGCACTATTATTGACAGTCTTTGTAAAGACAGGCTGTTGAATAAGGCTTTGAAACTCTTCTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34288.p1 GENE.S_Transcript_34288~~S_Transcript_34288.p1 ORF type:3prime_partial len:266 (+),score=34.14,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|3.8e-12,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|8.7e-05,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.0064,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|4.6e-09,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.088,PPR|PF01535.16|0.058,PPR|PF01535.16|0.0039,PPR|PF01535.16|0.00059,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|20 S_Transcript_34288:297-1091(+)
MAMAVKASSSSLHLHVGKFYPQYLFFSPFHFQFLFCPYTCTKCYSTSIPRNYIHAHPLSFLESVKQQSKLGFRDLDLPLSLFNQMTSLRPLPCVVDFNQLFTAIAKMEKAHQPHSYSSAISLSRQLELSGLRPDLYFLSILTKCYCQLGRVDLSFSLLGKILKLGYPPDTVLFTTLLNGLIHSDNLPQAVNLLDKIVKLGIQPDIVTCGTMIKGLCRIGDNAGALRLLGNMDRSALCKPDLVIYSTIIDSLCKDRLLNKALKLFS

Click here to download the sequence:
Link to NCBI Protein BLAST